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RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_1
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

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27..413
-----------------
DNA (387bp)
protein (129aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_2
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(427..672)
-----------------
DNA (246bp)
protein (82aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Putative uncharacterized protein id=4649070 bin=GWA2_OP3_52_12 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_3
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

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comp(870..1139)
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00036520EA
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_4
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

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1321..1854
-----------------
DNA (534bp)
protein (178aa)
Nuclear protein SET n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCR5_HYPSM
Nuclear protein SET Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_5
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

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1909..2673
-----------------
DNA (765bp)
protein (255aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_6
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

2755..3156
-----------------
DNA (402bp)
protein (134aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_7
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

3215..3466
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
hypothetical protein id=15190276 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_8
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3494..4228)
-----------------
DNA (735bp)
protein (245aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_9
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

4351..4650
-----------------
DNA (300bp)
protein (100aa)
id=5087768 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
id=5087768 bin=OP11_3 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_10
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

4733..5221
-----------------
DNA (489bp)
protein (163aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_11
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

5378..5749
-----------------
DNA (372bp)
protein (124aa)
conserved membrane protein of unknown function
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_12
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

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5752..5994
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1X179_9BACT
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
excinuclease ABC C subunit domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_13
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

6004..6996
-----------------
DNA (993bp)
protein (331aa)
cgtA; Obg family GTPase CgtA; K03979 GTP-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
obgE; GTPase ObgE; K03979 GTP-binding protein id=14423789 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin11_novelCP organism_group=Unknown_CP
cgtA; Obg family GTPase CgtA
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_14
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6950..7648)
-----------------
DNA (699bp)
protein (233aa)
RNA pseudouridine synthase family protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Ribosomal large subunit pseudouridine synthase F id=4649065 bin=GWA2_OP3_52_12 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RNA pseudouridine synthase family protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_15
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

7677..7814
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_16
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

8004..9287
-----------------
DNA (1284bp)
protein (428aa)
putative DEAD/DEAH box helicase domain protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
DEAD/DEAH box helicase domain protein id=3012795 bin=GWC1_OD1_38_17 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ATP-dependent RNA helicase RhlE
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_17
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

9316..9459
-----------------
DNA (144bp)
protein (48aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_18
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

9555..9944
-----------------
DNA (390bp)
protein (130aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_19
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

10028..10249
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
hypothetical protein; K09131 hypothetical protein id=5803615 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_20
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

10350..11471
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE7_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_21
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

11473..12696
-----------------
DNA (1224bp)
protein (408aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
gdhA; glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=15189360 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
glutamate dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_22
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12727..12933
-----------------
DNA (207bp)
protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_23
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12935..13321
-----------------
DNA (387bp)
protein (129aa)
Uncharacterised protein family YphA Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Uncharacterised protein family YphA id=5041721 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_24
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

13595..13954
-----------------
DNA (360bp)
protein (120aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_25
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

14021..15544
-----------------
DNA (1524bp)
protein (508aa)
amidophosphoribosyltransferase (EC:2.4.2.14) Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
amidophosphoribosyltransferase (EC:2.4.2.14)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DU51_9BACT
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_26
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

15684..16097
-----------------
DNA (414bp)
protein (138aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_27
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

16228..17418
-----------------
DNA (1191bp)
protein (397aa)
UniRef90_B5JFU9 Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT id=983001 bin=RAAC1_SR1 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RAAC1_SR1 organism_group=SR1
Peptidase M29 aminopeptidase II Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Thermophilic metalloprotease (M29) superfamily
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_28
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

17449..17796
-----------------
DNA (348bp)
protein (116aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Dihydroneopterin aldolase n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RME2_MYCXE
dihydroneopterin aldolase
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_29
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

17845..18372
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein
id=2185733 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
id=2185733 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_55_79_rifcsphigho2_01_scaffold_32363_30
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18328..18909)
-----------------
DNA (582bp)
protein (194aa)
glycerol acyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
Phosphoesterase PA-phosphatase related protein id=2824589 bin=GWC1_OD1_38_17 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycerol acyltransferase
Displaying items 1-30 of 31 in total

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