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RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(3..1211)
-----------------
DNA (1209bp)
protein (403aa)
Trans_reg_C 345..420 id=71599 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Trans_reg_C 345..420 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(1997..2281)
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B1S4_9BACT
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2278..2592)
-----------------
DNA (315bp)
protein (105aa)
Putative uncharacterized protein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KE69_CHLTE
hypothetical protein; K09803 hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2648..3097)
-----------------
DNA (450bp)
protein (150aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_16_RIF_OP11_02_41_13_curated
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=75719 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S7
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


comp(3138..3584)
-----------------
DNA (447bp)
protein (149aa)
30S ribosomal protein S12 n=1 Tax=uncultured bacterium RepID=K2AM55_9BACT
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_16_RIF_OP11_02_41_13_curated
rpsL; 30S ribosomal protein S12
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3604..7347)
-----------------
DNA (3744bp)
protein (1248aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_16_RIF_OP11_02_41_13_curated
DNA-directed RNA polymerase subunit beta' n=1 Tax=uncultured bacterium RepID=K2AME9_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_7
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

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comp(7352..10663)
-----------------
DNA (3312bp)
protein (1104aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
adg:Adeg_1532 DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=75366 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(10772..11725)
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein; K07082 id=75363 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
YceG family protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_9

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comp(11730..11930)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A3R6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD62600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(11923..12300)
-----------------
DNA (378bp)
protein (126aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=75367 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_11

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comp(12297..12968)
-----------------
DNA (672bp)
protein (224aa)
sortase family protein; K07284 sortase A id=75364 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD62602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12971..15106)
-----------------
DNA (2136bp)
protein (712aa)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein id=85081 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


comp(15116..16936)
-----------------
DNA (1821bp)
protein (607aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7) Tax=RBG_16_RIF_OP11_02_41_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E431_9BACT
Alanine-tRNA ligase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17065..17304
-----------------
DNA (240bp)
protein (80aa)
AbrB/MazE/MraZ-like Tax=RBG_16_RIF_OP11_02_41_13_curated
AbrB/MazE/MraZ-like id=85569 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17306..17677
-----------------
DNA (372bp)
protein (124aa)
putative nucleic-acid-binding protein, contains PIN domain Tax=RBG_16_RIF_OP11_02_41_13_curated
seg 17..34 id=85568 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative nucleic-acid-binding protein, contains PIN domain
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(17757..18002)
-----------------
DNA (246bp)
protein (82aa)
transmembrane_regions 7..29 Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 7..29 id=85565 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18002..18625)
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein; K15539 cytoskeleton protein RodZ Tax=RBG_16_RIF_OP11_02_41_13_curated
Xre-like DNA-binding protein id=85567 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5212_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18638..20752)
-----------------
DNA (2115bp)
protein (705aa)
DNA translocase FtsK n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3K3_THEOJ id=5086743 bin=GWF1_OP11_31_35_complete species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RBG_16_RIF_OP11_02_41_13_curated
DNA translocase FtsK
Displaying 18 items

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