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RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2..121
DNA (120bp) protein (40aa)
Integrase n=2 Tax=Yersinia RepID=C4U858_YERAL id=75820 bin=ACD52 species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Integrase Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(167..949)
DNA (783bp) protein (261aa)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein id=52309 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1188..1418)
DNA (231bp) protein (77aa)
id=5087066 Tax=RBG_16_RIF_OP11_02_41_13_curated
id=5087066 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2056..2238)
DNA (183bp) protein (61aa)
GreA_GreB 26..57 id=74963 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
GreA_GreB 26..57 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2263..2871
DNA (609bp) protein (203aa)
transmembrane_regions 7..26 id=74960 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 7..26 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2858..3781)
DNA (924bp) protein (308aa)
hypothetical protein id=74962 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4070..4831)
DNA (762bp) protein (254aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=bacterium S5 RepID=D3BY99_9BACT id=74958 bin=ACD52 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4840..5310)
DNA (471bp) protein (157aa)
seg 8..21 id=74965 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5310..6065)
DNA (756bp) protein (252aa)
transmembrane_regions 7..29 id=74964 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 7..29 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6526..7203
DNA (678bp) protein (226aa)
seg 86..101 id=74959 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
seg 86..101 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7200..7703)
DNA (504bp) protein (168aa)
nuclear protein SET Tax=RBG_16_RIF_OP11_02_41_13_curated
nuclear protein SET id=75409 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
nuclear protein SET
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7731..8069
DNA (339bp) protein (113aa)
transmembrane_regions 7..26 id=75405 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 7..26 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8084..8251
DNA (168bp) protein (56aa)
hypothetical protein id=75406 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(8389..9648)
DNA (1260bp) protein (420aa)
tvo:TVN0760 glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=75417 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
gdh; glutamate dehydrogenase (NAD(P)+); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RBG_16_RIF_OP11_02_41_13_curated
glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.3)
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9765..9959
DNA (195bp) protein (65aa)
Ribosomal_S21 3..51 id=75410 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Ribosomal_S21 3..51 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9956..10603)
DNA (648bp) protein (216aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=75411 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
ribonuclease HII/HIII Tax=RBG_16_RIF_OP11_02_41_13_curated
ribonuclease HII/HIII
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10645..10848
DNA (204bp) protein (68aa)
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE id=75412 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RBG_16_RIF_OP11_02_41_13_curated
secE; preprotein translocase subunit SecE
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10850..11470
DNA (621bp) protein (207aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=75414 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RBG_16_RIF_OP11_02_41_13_curated
NusG antitermination factor
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


11486..11911
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=uncultured bacterium RepID=K2B2D5_9BACT
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_RIF_OP11_02_41_13_curated
rplK; 50S ribosomal protein L11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


11904..12722
DNA (819bp) protein (273aa)
50S ribosomal protein L1 n=2 Tax=Mobiluncus mulieris RepID=C2KMR7_9ACTO id=75415 bin=ACD52 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 Tax=RBG_16_RIF_OP11_02_41_13_curated
50S ribosomal protein L1P
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12719..14227)
DNA (1509bp) protein (503aa)
transmembrane_regions 25..44 Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 25..44 id=75413 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

14234..15598
DNA (1365bp) protein (455aa)
hypothetical protein id=75408 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

15643..16116
DNA (474bp) protein (158aa)
hypothetical protein id=75407 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(16383..16994)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D1Y2_9BACT
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(16978..17568)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELM9_9BACT
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17801..18202
DNA (402bp) protein (134aa)
DNA polymerase beta domain protein region Tax=RBG_16_RIF_OP11_02_41_13_curated
DNA polymerase beta domain protein region id=4547811 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

18189..18626
DNA (438bp) protein (146aa)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Uncharacterized protein id=4834171 bin=GWC2_Methylomirabilis_70_16 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

18619..20139
DNA (1521bp) protein (507aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(20616..20822)
DNA (207bp) protein (69aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5521_30

Not on your lists

20879..21268
DNA (390bp) protein (130aa)
coiled-coil 92..113 id=85684 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD57832.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 30 items

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