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RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3..1220
DNA (1218bp) protein (406aa)
resolvase domain-containing protein id=85069 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Resolvase protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1363..2553)
DNA (1191bp) protein (397aa)
hypothetical protein CNitlB_11264 Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein CNitlB_11264 id=3594569 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2564..2755
DNA (192bp) protein (64aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3061..4671
DNA (1611bp) protein (537aa)
Recombinase n=1 Tax=uncultured bacterium RepID=K2C163_9BACT
recombinase Tax=RBG_16_RIF_OP11_02_41_13_curated
recombinase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


4784..5863
DNA (1080bp) protein (360aa)
chy:CHY_1166 recA; RecA protein; K03553 recombination protein RecA id=85481 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
recA protein; K03553 recombination protein RecA Tax=RBG_16_RIF_OP11_02_41_13_curated
recA protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5919..6602)
DNA (684bp) protein (228aa)
hypothetical protein id=85478 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6623..7252
DNA (630bp) protein (210aa)
regulatory protein RecX; K03565 regulatory protein id=85477 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
regulatory protein RecX; K03565 regulatory protein Tax=RBG_16_RIF_OP11_02_41_13_curated
regulatory protein RecX
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7364..8608
DNA (1245bp) protein (415aa)
hypothetical protein; K06950 id=85485 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K06950 uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8665..8943
DNA (279bp) protein (93aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RBG_16_RIF_OP11_02_41_13_curated
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta id=85486 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
histone family protein DNA-binding protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8957..9970
DNA (1014bp) protein (338aa)
ABC transporter ATPase Tax=RBG_16_RIF_OP11_02_41_13_curated
psl:Psta_3780 ABC transporter related protein; K01990 ABC-2 type transport system ATP-binding protein id=75072 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
ABC transporter ATPase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9963..10763
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A9_9BACT id=85483 bin=ACD57 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ABC-2 transporter family protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10760..11554
DNA (795bp) protein (265aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_RIF_OP11_02_41_13_curated
protein of unknown function DUF990; K01992 ABC-2 type transport system permease protein id=85479 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11554..11826
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EG86_9BACT
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11807..12049
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E3V5_9BACT
hypothetical protein
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

12109..13068
DNA (960bp) protein (320aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RBG_16_RIF_OP11_02_41_13_curated
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium RepID=K2AKF2_9BACT
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13072..14064
DNA (993bp) protein (331aa)
permease Tax=RBG_16_RIF_OP11_02_41_13_curated
protein of unknown function UPF0118 id=75074 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

14087..14323
DNA (237bp) protein (79aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(14227..15177)
DNA (951bp) protein (317aa)
type 11 SAM-dependent methyltransferase Tax=RBG_16_RIF_OP11_02_41_13_curated
type 11 SAM-dependent methyltransferase id=22810 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
type 11 SAM-dependent methyltransferase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15147..15848)
DNA (702bp) protein (234aa)
glycosyl transferase family protein Tax=RBG_16_RIF_OP11_02_41_13_curated
glycosyl transferase family protein id=22809 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
glycosyl transferase family protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15855..17192)
DNA (1338bp) protein (446aa)
glycosyl transferase family protein Tax=RBG_16_RIF_OP11_02_41_13_curated
seg 65..86 id=22808 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17235..17702
DNA (468bp) protein (156aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RBG_16_RIF_OP11_02_41_13_curated
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured bacterium RepID=K2EVC8_9BACT
D-tyrosyl-tRNA(Tyr) deacylase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17702..18307
DNA (606bp) protein (202aa)
transmembrane_regions 7..26 Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 7..26 id=91920 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18304..18909)
DNA (606bp) protein (202aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_RIF_OP11_02_41_13_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=uncultured bacterium RepID=K2ET56_9BACT
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18980..19111)
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG67_9EURY id=85879 bin=ACD57 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19124..19393)
DNA (270bp) protein (90aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

19469..19936
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FRE5_9BACT
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

19902..21137
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ET16_9BACT
PT repeat-containing protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

21175..21759
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH id=85466 bin=ACD57 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase beta domain-containing protein region Tax=RBG_16_RIF_OP11_02_41_13_curated
Transcriptional regulator
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

21801..23036
DNA (1236bp) protein (412aa)
Protein-export membrane protein SecD n=2 Tax=Selenomonas RepID=D4S7Z7_9FIRM id=85468 bin=ACD57 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RBG_16_RIF_OP11_02_41_13_curated
protein-export membrane protein SecD
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5334_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

23049..23915
DNA (867bp) protein (289aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RBG_16_RIF_OP11_02_41_13_curated
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF id=85467 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Protein translocase subunit SecF
Displaying items 1-30 of 31 in total

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