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RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_14

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_48_9

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 10 / 38 MC: 1
Location: 16799..17716

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 589
  • Evalue 2.10e-165
RNA polymerase sigma factor id=4080729 bin=GWC2_OP3-like_45_7 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica) similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 275.0
  • Bit_score: 446
  • Evalue 1.60e-122
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 271.0
  • Bit_score: 261
  • Evalue 2.60e-67

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Taxonomy

R_WOR_2_48_11 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 918
ATGGATCCCATTAAAGCCTACCTCAAAGATGTCCGGCCTATTGCGCTTTTGACCGCGGAACAGGAATTGGACTTAGCCCGCAAAATCCAAAAGGGCGATAAAAAAGCCCGGGAGATGATGATCCGCGCGAATTTGCGTTTGGTGATCAGCATTGCCAAGCGCTACATCAACCTCGGCGTGCCTTTGAGCGATTTGATCGAGGAAGGCAATATCGGGCTCATGAAGAGCGTTGAAAAATATGACCCGGAACGGGGTTTCCGTTTTTCGACTTATGCCGCGTGGTGGATCAAGCAGGGGATCTCTCGCGCCATCATTGATCAGGGAAAAATGATCCGTGTGCCGGTGTACATGAATGAGGAAATTCTCAAGTATAAAAAAGTCACGGAATCTCTGACGCATAAATTGAAACGCAAGCCGCGCATGAATGAGATCGCCAAAAGACTGCAAGTCACGATAGAGAAAGTGCGGGAGCTGGAGAATTCCATTGCCAAGATGTCGAGCCTGGACGCGCCCATCGGCGAAGAAGGCGACGGCCAGATCCGCGACATCATCGAAGACCAGTCCATGGTCGCGCCCGACGAAGAATTGGAGACATTTTTTAACAAAGAGCGGGCGATGGGTTTTTTGCAGATCCTCAATGAGCGGGAAAAGAAGATCCTGGATATGCGTTATGGTTTGACCGACGGCAATACGCATACCTTGGCGGAGATCGCGCGGGTCATGGGGGTTTCGCGGGAGCGGGTGAGACAGCTGGAAGCGGCCACCATCAAAAAGATCCGCAATGTCATTAAACAAAAAGAACGTATTCAAGATATTGATAATCAGGGTCAGGCCGAAGCGGTCCAGGTTAAACCGGCCAATAAGCTGCCCGGCGGACTGATATTGCGGCGGGCGAAACGGATCTCCCCCGCGAAGTAG
PROTEIN sequence
Length: 306
MDPIKAYLKDVRPIALLTAEQELDLARKIQKGDKKAREMMIRANLRLVISIAKRYINLGVPLSDLIEEGNIGLMKSVEKYDPERGFRFSTYAAWWIKQGISRAIIDQGKMIRVPVYMNEEILKYKKVTESLTHKLKRKPRMNEIAKRLQVTIEKVRELENSIAKMSSLDAPIGEEGDGQIRDIIEDQSMVAPDEELETFFNKERAMGFLQILNEREKKILDMRYGLTDGNTHTLAEIARVMGVSRERVRQLEAATIKKIRNVIKQKERIQDIDNQGQAEAVQVKPANKLPGGLILRRAKRISPAK*