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RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_1
R_WOR_2_48_11, WOR-2, Bacteria

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comp(1..2016)
-----------------
DNA (2016bp)
protein (672aa)
Superfamily II helicase (EC:3.6.1.-); K03726 helicase [EC:3.6.4.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Putative ski2-type helicase id=4556804 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
DEAD/DEAH box helicase
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_2
R_WOR_2_48_11, WOR-2, Bacteria

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2107..2547
-----------------
DNA (441bp)
protein (147aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
D-tyrosyl-tRNA(Tyr) deacylase id=4556879 bin=GWA2_OP3_53_43 species=Thermotoga neapolitana genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
D-tyrosyl-tRNA(Tyr) deacylase
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_3
R_WOR_2_48_11, WOR-2, Bacteria

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2633..3427
-----------------
DNA (795bp)
protein (265aa)
Hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Hydrolase, TatD family id=4556885 bin=GWA2_OP3_53_43 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Hydrolase, TatD family
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_4
R_WOR_2_48_11, WOR-2, Bacteria

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3441..5507
-----------------
DNA (2067bp)
protein (689aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
hypothetical protein id=4556889 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_5
R_WOR_2_48_11, WOR-2, Bacteria

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5704..6411
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Uncharacterized protein id=2527160 bin=GWC2_OP3-like_45_7 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_6
R_WOR_2_48_11, WOR-2, Bacteria

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6422..6967
-----------------
DNA (546bp)
protein (182aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A4V4_MELRP
Membrane-associated phospholipid phosphatase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Membrane-associated phospholipid phosphatase
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_7
R_WOR_2_48_11, WOR-2, Bacteria

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6957..8690
-----------------
DNA (1734bp)
protein (578aa)
phP C-terminal domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
DNA-directed DNA polymerase id=4556894 bin=GWA2_OP3_53_43 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
phP C-terminal domain-containing protein
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_8
R_WOR_2_48_11, WOR-2, Bacteria

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8722..9597
-----------------
DNA (876bp)
protein (292aa)
sulfide dehydrogenase (flavoprotein) subunit SudB; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Sulfide dehydrogenase (Flavoprotein) subunit SudB id=4556897 bin=GWA2_OP3_53_43 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
ferredoxin-NADP(+) reductase subunit alpha
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_9
R_WOR_2_48_11, WOR-2, Bacteria

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9660..10808
-----------------
DNA (1149bp)
protein (383aa)
glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Oxidoreductase Fe-S binding subunit id=3858444 bin=GWF2_OP3_38_59 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
glutamate synthase (NADPH), homotetrameric
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_10
R_WOR_2_48_11, WOR-2, Bacteria

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10899..11732
-----------------
DNA (834bp)
protein (278aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=4556904 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_11
R_WOR_2_48_11, WOR-2, Bacteria

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11763..12239
-----------------
DNA (477bp)
protein (159aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_12
R_WOR_2_48_11, WOR-2, Bacteria

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12493..13821
-----------------
DNA (1329bp)
protein (443aa)
ASCG--Glycyl-tRNA--synthetase
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Glycyl-tRNA synthetase id=2263858 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
glycyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_13
R_WOR_2_48_11, WOR-2, Bacteria

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13879..16680
-----------------
DNA (2802bp)
protein (934aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase id=2263856 bin=GWA2_OP3_53_43 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_14
R_WOR_2_48_11, WOR-2, Bacteria

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16799..17716
-----------------
DNA (918bp)
protein (306aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RNA polymerase sigma factor id=4080729 bin=GWC2_OP3-like_45_7 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RpoD subfamily RNA polymerase sigma-70 subunit
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_15
R_WOR_2_48_11, WOR-2, Bacteria

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17742..18605
-----------------
DNA (864bp)
protein (288aa)
degA; degradation activator Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Transcriptional regulator, LacI family id=2263830 bin=GWA2_OP3_53_43 species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
degA; degradation activator
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_16
R_WOR_2_48_11, WOR-2, Bacteria

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18625..19173
-----------------
DNA (549bp)
protein (183aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase id=4080646 bin=GWC2_OP3-like_45_7 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_17
R_WOR_2_48_11, WOR-2, Bacteria

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19397..19867
-----------------
DNA (471bp)
protein (157aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_18
R_WOR_2_48_11, WOR-2, Bacteria

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19985..20377
-----------------
DNA (393bp)
protein (131aa)
Secreted protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Secreted protein id=3396175 bin=GWF2_OP3_43_52 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_19
R_WOR_2_48_11, WOR-2, Bacteria

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20396..20821
-----------------
DNA (426bp)
protein (142aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Putative uncharacterized protein id=4680010 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_20
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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20833..22674
-----------------
DNA (1842bp)
protein (614aa)
glgP; glycogen phosphorylase (EC:2.4.1.1)
Glycogen phosphorylase n=1 Tax=planctomycete KSU-1 RepID=I3INE6_9PLAN
Glycogen phosphorylase {ECO:0000313|EMBL:GAB63241.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_21
R_WOR_2_48_11, WOR-2, Bacteria

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22691..24013
-----------------
DNA (1323bp)
protein (441aa)
cebC; Chemiosmotic efflux system B protein C Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Outer membrane efflux protein id=4769512 bin=GWA2_OP3_52_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cebC; Chemiosmotic efflux system B protein C
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_22
R_WOR_2_48_11, WOR-2, Bacteria

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24003..25361
-----------------
DNA (1359bp)
protein (453aa)
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Efflux transporter, RND family, MFP subunit id=3630099 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RND family efflux transporter MFP subunit
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_23
R_WOR_2_48_11, WOR-2, Bacteria

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25351..28659
-----------------
DNA (3309bp)
protein (1103aa)
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Uncharacterized protein id=8266274 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
CzcA family heavy metal efflux protein
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_24
R_WOR_2_48_11, WOR-2, Bacteria

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29200..30519
-----------------
DNA (1320bp)
protein (440aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
hypothetical protein id=14428767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_2374_25
R_WOR_2_48_11, WOR-2, Bacteria

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30999..31637
-----------------
DNA (639bp)
protein (213aa)
id=4297276 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
id=4297276 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Displaying 25 items

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