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RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_8

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_48_9

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 10 / 38 MC: 1
Location: 5549..6916

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 455.0
  • Bit_score: 883
  • Evalue 1.40e-253
RNA polymerase, sigma 54 subunit, RpoN id=4123574 bin=GWC2_OP3-like_45_7 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica) similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 461.0
  • Bit_score: 451
  • Evalue 1.20e-123
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 459.0
  • Bit_score: 310
  • Evalue 7.40e-82

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Taxonomy

R_WOR_2_48_11 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 1368
ATGAAGATCAATATCTCAACACAACAGGTCCAAAAACAGATCCTTGCCCCGGCTGTACAGCAGTCTATTGAGATCTTGCTGCTTCCCCTTCAGGACCTGCACCTTACGATTGAGCAGGAATTGCAAAGCAATCCCCTTTTGGAACTGGACGAAAGCCATCCAGAGACCGCAAAACTCCCTTGGAGCGAAAAATTTATACAGCAAATAAAGCATTACGAAAAGGCTAACTCTTCTGATTATTCTTCGCAAGAGGCAGGCGATGACCTGCCGGAGGAGAGTCCCCTGAAGCGTGAAATCAGTTTAGAAGAAAATCTCCTTCGGCAGCTGCGGATAGAAACATCCAATCTCCTGGAGTTAAAAATCGGCGAATTTATTATCGGCAATCTGGATGAGGATGGTTATCTCAAGTTAAGCCCAACCGACATCGCCCAGGCCTTCAGCCTGACGGATACGGTCCTGGTGGAACGTGTCCTGCAGATCATTCATGGATTCGAACCGATAGGAGTTGCCGCATGCACACTGCAAGAGTGCCTCTTAACGCAAGCTGAAATCAAATATAACGGCACACAGCCGCTCGTTTCACAGATCATCCAAGGATATTTAAAAGAAATCAGCCAGAAAAAACTCACTGAGGTTGCCAAGAAATTAAATGTTTCGCATGCGGAAGTTGCGGAGGCGATCAAGATCATTGCCGCCTTAGACCCCAAACCGGCACGGAATTATCGCCCCATCGACCCGACCATTTTCATTAAGCCTGATGTCGTGATCACCAAGGATGAAGATGTTCTGGAAGTGACGGTAAGCCAGGAAGGTACGCCCCGCTTACGGATCAACCCGCTCTACCGCGCGATGCTTAATCAACCGCATCTCAGCGAAGAAGAAAGAAATTTTATCCGCGAAAAACTTAAAAACGCGCTACAGTTTATCAAGAGCATCGAACAACGTGGACAGACGCTCAAAGCCATTACCTATTATATTTTGGACAAACAAAAAGCATTTTTCGAACAAGGCCCCAAAGCCCTGGTGCCGATGACGCTCAAAAACATTGCCGCTTCCTTAAACCGCAATGAATCGACCATCAGCCGCGCGATAAGCCACAAATACATCGATACTCCCCAGGGGATATTCCCTTTCAAATTCTTCTTTTCCCAAGGGATCGGCGAAGAGGCGGTCAATGGAGAGATTTGTTCACGCAGTGTTAAGGAAGAGATCAAAGAGATTGTCGAAGGGGAAAATAAATATTCCCCGCTTTCCGATCACGACATTCAAATGCTGCTCGAAAAACGAGGCATGCATGTGGCTCGACGCACCATCAGCAAATACCGGCAAGTTTTAAATATCCTTCCCTCCCACCTGCGAAAAGGATAA
PROTEIN sequence
Length: 456
MKINISTQQVQKQILAPAVQQSIEILLLPLQDLHLTIEQELQSNPLLELDESHPETAKLPWSEKFIQQIKHYEKANSSDYSSQEAGDDLPEESPLKREISLEENLLRQLRIETSNLLELKIGEFIIGNLDEDGYLKLSPTDIAQAFSLTDTVLVERVLQIIHGFEPIGVAACTLQECLLTQAEIKYNGTQPLVSQIIQGYLKEISQKKLTEVAKKLNVSHAEVAEAIKIIAALDPKPARNYRPIDPTIFIKPDVVITKDEDVLEVTVSQEGTPRLRINPLYRAMLNQPHLSEEERNFIREKLKNALQFIKSIEQRGQTLKAITYYILDKQKAFFEQGPKALVPMTLKNIAASLNRNESTISRAISHKYIDTPQGIFPFKFFFSQGIGEEAVNGEICSRSVKEEIKEIVEGENKYSPLSDHDIQMLLEKRGMHVARRTISKYRQVLNILPSHLRKG*