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RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_1
R_WOR_2_48_11, WOR-2, Bacteria

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comp(3..752)
-----------------
DNA (750bp)
protein (250aa)
capsular exopolysaccharide family protein (EC:2.7.10.2) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family protein (Fragment) id=4123563 bin=GWC2_OP3-like_45_7 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_2
R_WOR_2_48_11, WOR-2, Bacteria

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comp(772..1335)
-----------------
DNA (564bp)
protein (188aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_3
R_WOR_2_48_11, WOR-2, Bacteria

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comp(1359..1769)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003712E78
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_4
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(1769..2647)
-----------------
DNA (879bp)
protein (293aa)
ATPase; K02450 general secretion pathway protein A Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
General secretion pathway protein A id=4930896 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
ATPase
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_5
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(2663..3973)
-----------------
DNA (1311bp)
protein (437aa)
polysaccharide chain length determinant protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Polysaccharide chain length determinant protein id=4930895 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
polysaccharide chain length determinant protein
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_6
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(4037..4924)
-----------------
DNA (888bp)
protein (296aa)
polysaccharide export protein Wza; K01991 polysaccharide export outer membrane protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Polysaccharide export protein (Fragment) id=4930867 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
polysaccharide export protein Wza
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_7
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(4962..5189)
-----------------
DNA (228bp)
protein (76aa)
Polysaccharide export protein (Fragment) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Polysaccharide export protein (Fragment) id=4930866 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_8
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

5549..6916
-----------------
DNA (1368bp)
protein (456aa)
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
RNA polymerase, sigma 54 subunit, RpoN id=4123574 bin=GWC2_OP3-like_45_7 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
rpoN; RNA polymerase sigma-54 factor
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_9
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(6935..7312)
-----------------
DNA (378bp)
protein (126aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-6-phosphate isomerase, bifunctional enzyme id=4123577 bin=GWC2_OP3-like_45_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPHIGHO2_01_FULL_OP3_48_9_rifcsphigho2_01_scaffold_29287_10
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(7324..7464)
-----------------
DNA (141bp)
protein (47aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Displaying 10 items

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