ggKbase home page

RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_1
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2..91
-----------------
DNA (90bp)
protein (30aa)
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=5803531 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


181..684
-----------------
DNA (504bp)
protein (168aa)
rpsA; 30S ribosomal protein S1
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(755..1012)
-----------------
DNA (258bp)
protein (86aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1239..1484)
-----------------
DNA (246bp)
protein (82aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036E2F04
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1533..2117)
-----------------
DNA (585bp)
protein (195aa)
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=5803533 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidyl-tRNA hydrolase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
peptidyl-tRNA hydrolase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2220..2807
-----------------
DNA (588bp)
protein (196aa)
D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC:2.7.1.- 2.7.7.-); K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Tax=RIFCSPHIGHO2
D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose 1-phosphate adenylyltransferase (EC:2.7.7.- 2.7.1.-) id=137802 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC:2.7.1.- 2.7.7.-)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2804..3667
-----------------
DNA (864bp)
protein (288aa)
deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FP28_9BACT
deoxycytidylate deaminase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3682..4131)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F7Y2_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4173..4697)
-----------------
DNA (525bp)
protein (175aa)
dihydrofolate reductase subunit; K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
dihydrofolate reductase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288B788
dihydrofolate reductase subunit
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4731..5642)
-----------------
DNA (912bp)
protein (304aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K2E0Q7_9BACT
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5718..5822
-----------------
DNA (105bp)
protein (35aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6204..6485)
-----------------
DNA (282bp)
protein (94aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_13
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7145..7675
-----------------
DNA (531bp)
protein (177aa)
Ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=15189861 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Ppa; inorganic pyrophosphatase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_14
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(7733..8779)
-----------------
DNA (1047bp)
protein (349aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_15
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(8788..10074)
-----------------
DNA (1287bp)
protein (429aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037E82AE
peptidase M16 domain-containing protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
peptidase M16 domain-containing protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

10163..11125
-----------------
DNA (963bp)
protein (321aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_17
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(11392..11508)
-----------------
DNA (117bp)
protein (39aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_18
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(11501..11974)
-----------------
DNA (474bp)
protein (158aa)
DNA polymerase subunit beta Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
DNA polymerase beta subunit id=129577 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
DNA polymerase subunit beta
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_19
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


comp(11978..13354)
-----------------
DNA (1377bp)
protein (459aa)
ASCG--Glycyl-tRNA--synthetase
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
toc:Toce_0822 glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=3051 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_20
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(13361..15271)
-----------------
DNA (1911bp)
protein (637aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_21
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(15286..15852)
-----------------
DNA (567bp)
protein (189aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
DNA repair protein RecO id=5227239 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA repair protein RecO
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1547_22
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(15864..18332)
-----------------
DNA (2469bp)
protein (823aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Displaying 22 items

View Taxonomy