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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_1
R_OD1_41_19, Parcubacteria, Bacteria

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1..225
-----------------
DNA (225bp)
protein (75aa)
Translation initiation factor IF-1 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI39_IGNAJ
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
infA; translation initiation factor IF-1
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_2
R_OD1_41_19, Parcubacteria, Bacteria

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402..782
-----------------
DNA (381bp)
protein (127aa)
BSCG--ribosomal--protein--S13
ASCG--Ribosomal--protein--S13
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5803405 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_3
R_OD1_41_19, Parcubacteria, Bacteria

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787..1224
-----------------
DNA (438bp)
protein (146aa)
BSCG--ribosomal--protein--S11
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5803406 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S11
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_4
R_OD1_41_19, Parcubacteria, Bacteria

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1255..1845
-----------------
DNA (591bp)
protein (197aa)
BSCG--ribosomal--protein--S4
30S ribosomal protein S4 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737841
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
rpsD; 30S ribosomal protein S4
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_5
R_OD1_41_19, Parcubacteria, Bacteria

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1867..2865
-----------------
DNA (999bp)
protein (333aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_6
R_OD1_41_19, Parcubacteria, Bacteria

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2899..3246
-----------------
DNA (348bp)
protein (116aa)
BSCG--ribosomal--protein--L17
LSU ribosomal protein L17P Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
50S ribosomal protein L17 id=5227097 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
LSU ribosomal protein L17P
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_7
R_OD1_41_19, Parcubacteria, Bacteria

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3255..3599
-----------------
DNA (345bp)
protein (115aa)
BSCG--ribosomal--protein--L13
rplM; ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L13
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_8
R_OD1_41_19, Parcubacteria, Bacteria

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3623..4084
-----------------
DNA (462bp)
protein (154aa)
BSCG--ribosomal--protein--S9
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
rpsI; 30S ribosomal protein S9
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_9
R_OD1_41_19, Parcubacteria, Bacteria

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4089..5498
-----------------
DNA (1410bp)
protein (470aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Pyruvate kinase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T3S8_THEIA
pyruvate kinase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_10
R_OD1_41_19, Parcubacteria, Bacteria

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5518..6234
-----------------
DNA (717bp)
protein (239aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Phospholipid/glycerol acyltransferase n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZVE8_THEET
phospholipid/glycerol acyltransferase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_11
R_OD1_41_19, Parcubacteria, Bacteria

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6261..7304
-----------------
DNA (1044bp)
protein (348aa)
Shikimate/quinate 5-dehydrogenase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NS47_9FIRM
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Shikimate/quinate 5-dehydrogenase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_12
R_OD1_41_19, Parcubacteria, Bacteria

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7335..8939
-----------------
DNA (1605bp)
protein (535aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=5803553 bin=OD1_GWC2_34_28 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
PAS/PAC sensor signal transduction histidine kinase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_13
R_OD1_41_19, Parcubacteria, Bacteria

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8991..10634
-----------------
DNA (1644bp)
protein (548aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
tit:Thit_2262 CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=134037 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
pyrG; CTP synthase (EC:6.3.4.2)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_14
R_OD1_41_19, Parcubacteria, Bacteria

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comp(10714..12123)
-----------------
DNA (1410bp)
protein (470aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2E6N6_9BACT
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_15
R_OD1_41_19, Parcubacteria, Bacteria

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12194..14008
-----------------
DNA (1815bp)
protein (605aa)
BSCG--tRNA--synthetase--arginyl
argS; arginine--tRNA ligase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
argS; arginine--tRNA ligase (EC:6.1.1.19)
UniRef90_C0GK94 Arginyl-tRNA synthetase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK94_9FIRM id=138710 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_16
R_OD1_41_19, Parcubacteria, Bacteria

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14089..14790
-----------------
DNA (702bp)
protein (234aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative uncharacterized protein id=3544251 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_17
R_OD1_41_19, Parcubacteria, Bacteria

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14813..15364
-----------------
DNA (552bp)
protein (184aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Frr; K02838 ribosome recycling factor id=5803375 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
frr; ribosome-recycling factor Frr
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_18
R_OD1_41_19, Parcubacteria, Bacteria

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15364..16416
-----------------
DNA (1053bp)
protein (351aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000364C39C
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_19
R_OD1_41_19, Parcubacteria, Bacteria

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16876..18108
-----------------
DNA (1233bp)
protein (411aa)
ASCG--Prolyl-tRNA--synthetase
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FAI3_9BACT
Prolyl-tRNA synthetase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_999_20
R_OD1_41_19, Parcubacteria, Bacteria

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18118..18654
-----------------
DNA (537bp)
protein (179aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Rod shape-determining protein MreB id=4241912 bin=GWC2_OD1_43_27 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rod shape-determining protein MreB
Displaying 20 items

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