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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_1
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

101..334
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

309..566
-----------------
DNA (258bp)
protein (86aa)
Asl4561 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YNK4_NOSS1
hypothetical protein; K06218 RelE protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

640..1431
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=5096057 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1453..2175
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein n=1 Tax=Vibrio sp. HENC-03 RepID=K5UR87_9VIBR
hypothetical protein; K09968 hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2165..2269
-----------------
DNA (105bp)
protein (35aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2373..3074
-----------------
DNA (702bp)
protein (234aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037B09BB
RluA family pseudouridine synthase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


3096..3521
-----------------
DNA (426bp)
protein (142aa)
BSCG--ribosomal--protein--L19
rplS; ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
50S ribosomal protein L19 id=5227487 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplS; 50S ribosomal protein L19
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_trna_1
unknown

Not on your lists

3653..3736
-----------------
DNA (84bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_trna_2
unknown

Not on your lists

3768..3838
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3834..4559)
-----------------
DNA (726bp)
protein (242aa)
id=5049653 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
id=5049653 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_trna_3
unknown

Not on your lists

4613..4683
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

4725..5489
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=2482479 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5496..6626
-----------------
DNA (1131bp)
protein (377aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=5226874 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein RodA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

6721..7494
-----------------
DNA (774bp)
protein (258aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
methyltransferase type 11 id=133837 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7537..8184
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein; K07491 putative transposase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Transposase id=5226892 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_13
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

8186..9274
-----------------
DNA (1089bp)
protein (363aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037BE5AA
ribosomal RNA large subunit methyltransferase N
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_14
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

9313..9864
-----------------
DNA (552bp)
protein (184aa)
LemA family protein; K03744 LemA protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
LemA-like protein id=2823749 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
membrane protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_15
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

9870..10340
-----------------
DNA (471bp)
protein (157aa)
NUDIX hydrolase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
NUDIX hydrolase id=5803376 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

10390..10671
-----------------
DNA (282bp)
protein (94aa)
Addiction module antitoxin, RelB/DinJ family Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Addiction module antitoxin, RelB/DinJ family id=3336325 bin=GWA2_OP3_53_43 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_17
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

10668..10949
-----------------
DNA (282bp)
protein (94aa)
addiction module antitoxin Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein LalesM3_06789 id=1859738 bin=GWB2_Nitrospirae_rel_47_37 species=Leptospira weilii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_18
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

10959..11864
-----------------
DNA (906bp)
protein (302aa)
Heat shock protein HtpX Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Protease HtpX homolog id=2823743 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Heat shock protein HtpX
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_19
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

11870..12580
-----------------
DNA (711bp)
protein (237aa)
Response regulator receiver domain protein n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FEB9_9GAMM
response regulator Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
response regulator
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_20
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

12691..12873
-----------------
DNA (183bp)
protein (61aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_trna_4
unknown

Not on your lists

12925..13009
-----------------
DNA (85bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_704_21
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

13229..13345
-----------------
DNA (117bp)
protein (39aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Displaying 25 items

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