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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_1
R_OD1_41_19, Parcubacteria, Bacteria

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comp(2..433)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381959E
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

571..1122
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX); K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPHIGHO2_02_OD1_41_
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1147..1317
-----------------
DNA (171bp)
protein (57aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1349..1975
-----------------
DNA (627bp)
protein (209aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
ribonuclease h (EC:3.1.26.4)
Ribonuclease HII id=3013150 bin=GWC1_OD1_38_17 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


1997..2233
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037E829D
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
50S ribosomal protein L32
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

2256..3134
-----------------
DNA (879bp)
protein (293aa)
putative transcription termination factor Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
NusB antitermination factor; K03625 N utilization substance protein B id=5226910 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative transcription termination factor
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

3131..3826
-----------------
DNA (696bp)
protein (232aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Ribonuclease 3 id=4790031 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

4123..4398
-----------------
DNA (276bp)
protein (92aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4678..5010)
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Cupin 2, conserved barrel domain protein id=3746562 bin=GWC2_Syntrophobacterales_56_13 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5060..6484
-----------------
DNA (1425bp)
protein (475aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=3423426 bin=GWA1_ZB2_49_26 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6599..7060)
-----------------
DNA (462bp)
protein (154aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_trna_1
unknown

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comp(7243..7324)
-----------------
DNA (82bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_3600_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7712..8005
-----------------
DNA (294bp)
protein (98aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
id=5227213 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
parB-like partition protein
Displaying 13 items

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