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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_1
R_OD1_41_19, Parcubacteria, Bacteria

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3..227
-----------------
DNA (225bp)
protein (75aa)
peptide chain release factor 2 n=1 Tax=Cloacimonetes bacterium JGI 0000039-A21 RepID=UPI00036587D0
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
peptide chain release factor 2
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_2
R_OD1_41_19, Parcubacteria, Bacteria

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247..933
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXU9_9BACT
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
cell division ATP-binding protein FtsE
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_3
R_OD1_41_19, Parcubacteria, Bacteria

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1062..1982
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein; K09811 cell division transport system permease protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
cell division protein; K09811 cell division transport system permease protein id=5803703 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsX
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_trna_1
unknown

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2043..2113
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_4
R_OD1_41_19, Parcubacteria, Bacteria

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comp(2159..2770)
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365C106
phosphoribosyltransferase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
phosphoribosyltransferase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_5
R_OD1_41_19, Parcubacteria, Bacteria

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2811..3908
-----------------
DNA (1098bp)
protein (366aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Type IV pilus assembly protein PilM id=5227304 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
type IV pilus assembly protein PilM
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_6
R_OD1_41_19, Parcubacteria, Bacteria

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4064..4609
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX); K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPHIGHO2_02_OD1_41_
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_7
R_OD1_41_19, Parcubacteria, Bacteria

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4806..5372
-----------------
DNA (567bp)
protein (189aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
transmembrane_regions id=5803084 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_8
R_OD1_41_19, Parcubacteria, Bacteria

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5374..5934
-----------------
DNA (561bp)
protein (187aa)
no description Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
no description id=5803083 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_9
R_OD1_41_19, Parcubacteria, Bacteria

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5939..6250
-----------------
DNA (312bp)
protein (104aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_10
R_OD1_41_19, Parcubacteria, Bacteria

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6266..7993
-----------------
DNA (1728bp)
protein (576aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_11
R_OD1_41_19, Parcubacteria, Bacteria

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8019..8402
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5803080 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Two component transcriptional regulator, winged helix
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_12
R_OD1_41_19, Parcubacteria, Bacteria

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8436..9500
-----------------
DNA (1065bp)
protein (355aa)
pilT; twitching motility protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
twitching motility protein; K02669 twitching motility protein PilT id=15190178 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
twitching motility protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_558_13
R_OD1_41_19, Parcubacteria, Bacteria

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9520..10731
-----------------
DNA (1212bp)
protein (404aa)
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Type II secretion system F domain
Displaying 14 items

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