ggKbase home page

RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_1
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1..1215
-----------------
DNA (1215bp)
protein (405aa)
ATPase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B40058
hypothetical protein; K07133 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1412..1642
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=130454 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1591..2322
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=130455 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2341..3210)
-----------------
DNA (870bp)
protein (290aa)
putative Tyrosine recombinase xerD Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
recombinase; K04763 integrase/recombinase XerD id=5803170 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative Tyrosine recombinase xerD
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3291..3563)
-----------------
DNA (273bp)
protein (91aa)
putative HU-related DNA-binding protein; phage SPbeta; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
nucleoid DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta id=5803144 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
HU-related DNA-binding protein; phage SPbeta
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3666..5180)
-----------------
DNA (1515bp)
protein (505aa)
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
phosphodiesterase; K06950 uncharacterized protein id=5803143 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
2,3 cyclic-nucleotide 2-phosphodiesterase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5344..6927
-----------------
DNA (1584bp)
protein (528aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3736606 bin=GWC2_OD1_43_27 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6936..7520)
-----------------
DNA (585bp)
protein (195aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=uncultured bacterium RepID=K1X2F6_9BACT
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(7571..8644)
-----------------
DNA (1074bp)
protein (358aa)
tig; trigger factor; K03545 trigger factor Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
tig; trigger factor; K03545 trigger factor id=5803132 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tig; trigger factor
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(8644..9108)
-----------------
DNA (465bp)
protein (155aa)
single-stranded nucleic acid-binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
single-stranded nucleic acid binding R3H; K06346 spoIIIJ-associated protein id=5803199 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-stranded nucleic acid-binding R3H domain-containing protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(9059..9820)
-----------------
DNA (762bp)
protein (254aa)
sporulation associated-membrane protein; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC id=5803200 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sporulation associated-membrane protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(9831..10166)
-----------------
DNA (336bp)
protein (112aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378939C
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_552_13
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

10265..10807
-----------------
DNA (543bp)
protein (181aa)
chromosomal replication initiator protein DnaA Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein id=5803203 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dnaA; chromosomal replication initiator protein DnaA
Displaying 13 items

View Taxonomy