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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_1
R_OD1_41_19, Parcubacteria, Bacteria

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3..113
-----------------
DNA (111bp)
protein (37aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_2
R_OD1_41_19, Parcubacteria, Bacteria

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247..1155
-----------------
DNA (909bp)
protein (303aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=5803612 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA formyltransferase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1156..1806)
-----------------
DNA (651bp)
protein (217aa)
Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362AC96
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1815..2444)
-----------------
DNA (630bp)
protein (210aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=3506534 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2449..2817)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000382823D
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2844..4058)
-----------------
DNA (1215bp)
protein (405aa)
peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT
Thermophilic metalloprotease (M29) superfamily
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4058..4222)
-----------------
DNA (165bp)
protein (55aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_trna_1
unknown

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comp(4572..4643)
-----------------
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4737..5024)
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative uncharacterized protein id=3012935 bin=GWC1_OD1_38_17 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(5029..6759)
-----------------
DNA (1731bp)
protein (577aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AL92_9BACT
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
atmA; ABC-type Ni2+/Co2+ export system bifunctional ATPase and permease components AtmA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

6853..7830
-----------------
DNA (978bp)
protein (326aa)
dihydrouridine synthase dus Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
tRNA-dihydrouridine synthase id=2922979 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
tRNA-dihydrouridine synthase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_1939_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(7787..7960)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036EFAB1
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Displaying 12 items

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