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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_1
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1..387)
-----------------
DNA (387bp)
protein (129aa)
Putative unusual protein kinase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K064_CLOPA
putative unusual protein kinase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
putative unusual protein kinase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(401..559)
-----------------
DNA (159bp)
protein (53aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(764..1195)
-----------------
DNA (432bp)
protein (144aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1249..1725)
-----------------
DNA (477bp)
protein (159aa)
TrmH family tRNA/rRNA methyltransferase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
rRNA methylase id=5098353 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
TrmH family tRNA/rRNA methyltransferase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1758..2165)
-----------------
DNA (408bp)
protein (136aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2239..3027)
-----------------
DNA (789bp)
protein (263aa)
ABC-3 protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELH5_9GAMM
ABC-3 protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
ABC-3 protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3017..3763)
-----------------
DNA (747bp)
protein (249aa)
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative zinc import ATP-binding protein ZnuC n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJ61_LEGLO
ABC transporter ATP-binding protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3870..4559)
-----------------
DNA (690bp)
protein (230aa)
small-conductance mechanosensitive ion channel Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
small-conductance mechanosensitive ion channel
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_trna_2
unknown

Not on your lists

comp(4741..4812)
-----------------
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4828..5136)
-----------------
DNA (309bp)
protein (103aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
transmembrane_regions id=5803495 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(5145..7355)
-----------------
DNA (2211bp)
protein (737aa)
O-antigen ligase WaaL Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
O-antigen ligase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7389..8672
-----------------
DNA (1284bp)
protein (428aa)
putative glycosyltransferase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycosyltransferase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

8708..9721
-----------------
DNA (1014bp)
protein (338aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Serine-type D-Ala-D-Ala carboxypeptidase id=3544187 bin=GWA1_ZB2_49_26 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_2270_trna_1
unknown

Not on your lists

9837..9907
-----------------
DNA (71bp)
transferRNA
Displaying 14 items

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