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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_1
R_OD1_41_19, Parcubacteria, Bacteria

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3..785
-----------------
DNA (783bp)
protein (261aa)
heavy metal translocating p-type atpase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=5801802 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_2
R_OD1_41_19, Parcubacteria, Bacteria

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818..1219
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Uncharacterized protein id=3736975 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Mannose-6-phosphate isomerase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_3
GWB1_OD1_43_8, Parcubacteria, Bacteria

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1414..1614
-----------------
DNA (201bp)
protein (67aa)
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN id=120539 bin=ACD76 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Cold shock-like protein Tax=GWB1_OD1_43_8
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_4
R_OD1_41_19, Parcubacteria, Bacteria

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1762..2475
-----------------
DNA (714bp)
protein (238aa)
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH06_9BACT id=6014 bin=ACD12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Putative PolB-like 3'-5' exonuclease; K07501 hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
PolB-like 3'-5' exonuclease
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_5
R_OD1_41_19, Parcubacteria, Bacteria

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comp(2499..2600)
-----------------
DNA (102bp)
protein (34aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_6
R_OD1_41_19, Parcubacteria, Bacteria

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2682..3545
-----------------
DNA (864bp)
protein (288aa)
yabD; TatD deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F497A
hydrolase TatD
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_7
R_OD1_41_19, Parcubacteria, Bacteria

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3736..4167
-----------------
DNA (432bp)
protein (144aa)
DNA polymerase beta protein n=1 Tax=uncultured bacterium RepID=K2EP08_9BACT
DNA polymerase beta protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_8
R_OD1_41_19, Parcubacteria, Bacteria

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4178..4606
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GBU5_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_9
R_OD1_41_19, Parcubacteria, Bacteria

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comp(4637..4984)
-----------------
DNA (348bp)
protein (116aa)
putative diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] id=13447 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
DeoR family transcriptional regulator
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_trna_1
unknown

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5085..5155
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_10
R_OD1_41_19, Parcubacteria, Bacteria

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5164..6666
-----------------
DNA (1503bp)
protein (501aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5803332 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_11
R_OD1_41_19, Parcubacteria, Bacteria

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6771..7196
-----------------
DNA (426bp)
protein (142aa)
DNA polymerase beta subunit n=1 Tax=uncultured bacterium RepID=K2FGM5_9BACT
DNA polymerase beta subunit Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7186..7611
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZL8_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_13
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7628..8887
-----------------
DNA (1260bp)
protein (420aa)
cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
cth:Cthe_0720 aminotransferase, class V; K04487 cysteine desulfurase [EC:2.8.1.7] id=3152162 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cysteine desulfurase NifS (EC:2.8.1.7)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_14
R_OD1_41_19, Parcubacteria, Bacteria

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8899..9312
-----------------
DNA (414bp)
protein (138aa)
nitrogen-fixing NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
nitrogen-fixing NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins id=5097896 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
nitrogen-fixing NifU domain-containing protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_15
R_OD1_41_19, Parcubacteria, Bacteria

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9335..10432
-----------------
DNA (1098bp)
protein (366aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein; K09760 DNA recombination protein RmuC id=5803499 bin=OD1_GWC2_34_28 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_16
R_OD1_41_19, Parcubacteria, Bacteria

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10525..11913
-----------------
DNA (1389bp)
protein (463aa)
BSCG--tRNA--synthetase--aspartyl
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Aspartyl-tRNA synthetase id=1947782 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
aspartyl-tRNA synthetase
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_17
R_OD1_41_19, Parcubacteria, Bacteria

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11926..12462
-----------------
DNA (537bp)
protein (179aa)
protein grpE Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
GrpE protein; K03687 molecular chaperone GrpE id=5803413 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein grpE
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_888_18
R_OD1_41_19, Parcubacteria, Bacteria

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12492..14186
-----------------
DNA (1695bp)
protein (565aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
Displaying 19 items

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