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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_1
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3..1889)
-----------------
DNA (1887bp)
protein (629aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1911..2177)
-----------------
DNA (267bp)
protein (89aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2279..2572)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Protein dedA, putative id=4965556 bin=GWA2_Deltaproteo_65_63 species=Ricinus communis genus=Ricinus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2887..3201)
-----------------
DNA (315bp)
protein (105aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_5
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3213..3836)
-----------------
DNA (624bp)
protein (208aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ECF subfamily RNA polymerase sigma-24 subunit
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

3931..4494
-----------------
DNA (564bp)
protein (188aa)
translation elongation factor P Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Elongation factor P id=4242105 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
translation elongation factor P
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

4623..4883
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=120007 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

4870..5109
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_trna_1
unknown

Not on your lists

5121..5191
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5259..6512
-----------------
DNA (1254bp)
protein (418aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


comp(6515..6715)
-----------------
DNA (201bp)
protein (67aa)
30S ribosomal protein S18 n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8ECR2_CARML
rpsR; ribosomal protein S18 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
rpsR; ribosomal protein S18
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6720..7172)
-----------------
DNA (453bp)
protein (151aa)
ssDNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ssDNA-binding protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_12
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


comp(7179..7619)
-----------------
DNA (441bp)
protein (147aa)
30S ribosomal protein S6 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S6 id=4790087 bin=GWC2_OD1_43_27 species=Helicobacter bizzozeronii genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S6
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_13
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(7695..7925)
-----------------
DNA (231bp)
protein (77aa)
YcfA family protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XXP1_STAC7
YcfA family protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
YcfA family protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_14
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(7918..8175)
-----------------
DNA (258bp)
protein (86aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUG0_ROSS1
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_15
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(8374..9624)
-----------------
DNA (1251bp)
protein (417aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
transmembrane_regions id=5227399 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(9638..10180)
-----------------
DNA (543bp)
protein (181aa)
id=2966245 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
id=2966245 bin=GWA1_ZB2_49_26 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_17
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(10187..11176)
-----------------
DNA (990bp)
protein (330aa)
seg Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
seg id=5803196 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_18
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(11187..11591)
-----------------
DNA (405bp)
protein (135aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_19
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(11591..13414)
-----------------
DNA (1824bp)
protein (608aa)
Type IV secretory pathway VirB4 component-like protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWV8_9BACT
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Type IV secretory pathway VirB4 components-like protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_20
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(13425..14060)
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=5803194 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_21
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(14108..14527)
-----------------
DNA (420bp)
protein (140aa)
seg Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
seg id=5803192 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_22
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(14608..14973)
-----------------
DNA (366bp)
protein (122aa)
S23 ribosomal protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative uncharacterized protein id=3701534 bin=GWF2_Planctomycetes_42_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
S23 ribosomal protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_23
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(15012..15638)
-----------------
DNA (627bp)
protein (209aa)
seg Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
seg id=5803190 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_323_24
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(15661..16761)
-----------------
DNA (1101bp)
protein (367aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Displaying 25 items

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