ggKbase home page

RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_10

Organism: Candidatus Terrybacteria bacterium RIFCSPHIGHO2_02_41_19

partial RP 37 / 55 MC: 3 BSCG 37 / 51 MC: 1 ASCG 8 / 38
Location: comp(7366..9168)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1145
  • Evalue 0.0
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=5802743 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 593.0
  • Bit_score: 581
  • Evalue 1.40e-162
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 546.0
  • Bit_score: 180
  • Evalue 2.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_41_19 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1803
ATGAAAAAAATTTTTCGCCGAATAAAAAACTTAGCTTTGAAGCATAAAATAATAAGCCTTATATTCATCGCCGCCATAGCTTACGCCGGTTATTGGGGATACCAAAAATTCGGCGCAAACTCCGGCCAAACTCAATATGTGACGGCAATTGTCCGCAAAGGCGCCGTTATAGTTTCCATTACCGGAAGCGGCCAGGTGGCGGCTTCCGGCCAATCGGACATAAAGCCGAAAGCGAGCGGAGAAATAACCGGTGTTTACGCAACGCCGGGACAAGAAGCTATAGCGGGAACTCTCTTGGCAATAATTGATTCTACTGATGCGGAACGAACGGCAAGAGATGCCGAGACGAGTTTAGAAACAGCCAAACTTGAATTGGATAAACTGCTTGAGCCAGCAGACGAACTGACCTTGCTTCAGGCCGAAAATTCTTTGGCGCAAACAAAAGAATCAAAGCAAAAAGCCGAAGATGACCTCAAAAAGGCGTATGAAGACGGGTTCAACGCCGTCGCCGGCGCGTTTCTTGAACTCCCGGGTGTTATGACCAGTCTTCAGGAGATGCTGTTTGAAAGCACTCTCGGCACGGGCGGACAATGGAACATTGATTATTACGAGGATGCCGTCAAAGCCTACGACGAAAAAGTGTCGCAATATAAAGAAACCGCCCGGCTGGCGTATCAGACGGCGCGAACGGCATATGATAAAAATTTCGCCGATTACAAGTCAACAAGCCGATTCGCCGATTTTAATACCGTAGAATCGCTTATAGGCGAAACTTACGACACGACAAAAGACATCGCGGAAGCGGTAAAAAACGCAAATAACCTTATTCAATTTTATCAAGACAAACTCACCGAAAGGAAACTCAAGCCGAATTCTCTTTCCAATACCCATCTCTCCACTTTAAGCGCCAACACCGGCAAAGCCAACAACAATCTCTCAAGCCTTCTTTCAATACAGCGAACCATCCAAAGTTCTAAAGAAGTGATAATAAGCGCCGAACGGTCAACCGAAGAAAAAGAATTATCGCTCGCAAAAATAAAAAAAGGACCGGACGATCTTGACATCCGCGCGAAAAAAATAAATATTCGGCAAAAAGAAGATATGCTCTCCACTGCGAAACAAACCCTGGCCGATCATTATGTTCGCGCGCCGTTTAGCGGCGTAATAGCCAAAGTGAACGCCAAAAAAGGAGATTCGGCTTCTGCCGGTGCCGCTATCGCCACGCTCGTCACCAAACAAAAAATATCGGAGATTTCCCTCAACGAAATAGACGCCGCCAAAATAAAAGTCGGGCAAAAATCAACGCTGACGTTTGACGCTGTTGACGGGTTGAGCATTGACGGCAAAGTGACGGAAATTGACGCTATCGGAACAGTCGCCCAAGGTGTTGTCACTTACAACGTAAAAATAGCCTTTGACATTCAGGACGATAGAGTAAAACCGGGAATGAGCGCCAGCGCGGCCATCATTACCGATGCGGCGCAAGATGTTCTTCTTGTTCCCATTAGCGCCATAAAATCGCAAGGCGAAACGCAATACGTGGAAATATTTGACCAAGCGATACCGCGGAACAAAAACGGTCAAGGAATTCCTTCTCCCGTTCCGCCAAGACAACAAATAATTGAAACCGGTCTTTCCAATGATACTTTCGTTGAAATTATTTCTGGGTTGAAAGAGGGAGACCAAGTGGTTGTAAGAACGATAAACGGCTCGTCTTCCAGTCAAAGTGCCCAACAAGCGCCAAGCATTCTTGGAAATATCGGGGGCAACAGAGGCGGAAGCGGAAATAGAATACCGCGTTAA
PROTEIN sequence
Length: 601
MKKIFRRIKNLALKHKIISLIFIAAIAYAGYWGYQKFGANSGQTQYVTAIVRKGAVIVSITGSGQVAASGQSDIKPKASGEITGVYATPGQEAIAGTLLAIIDSTDAERTARDAETSLETAKLELDKLLEPADELTLLQAENSLAQTKESKQKAEDDLKKAYEDGFNAVAGAFLELPGVMTSLQEMLFESTLGTGGQWNIDYYEDAVKAYDEKVSQYKETARLAYQTARTAYDKNFADYKSTSRFADFNTVESLIGETYDTTKDIAEAVKNANNLIQFYQDKLTERKLKPNSLSNTHLSTLSANTGKANNNLSSLLSIQRTIQSSKEVIISAERSTEEKELSLAKIKKGPDDLDIRAKKINIRQKEDMLSTAKQTLADHYVRAPFSGVIAKVNAKKGDSASAGAAIATLVTKQKISEISLNEIDAAKIKVGQKSTLTFDAVDGLSIDGKVTEIDAIGTVAQGVVTYNVKIAFDIQDDRVKPGMSASAAIITDAAQDVLLVPISAIKSQGETQYVEIFDQAIPRNKNGQGIPSPVPPRQQIIETGLSNDTFVEIISGLKEGDQVVVRTINGSSSSQSAQQAPSILGNIGGNRGGSGNRIPR*