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RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_1
R_OD1_41_19, Parcubacteria, Bacteria

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172..624
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYY4_UNCTG
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_2
R_OD1_41_19, Parcubacteria, Bacteria

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comp(893..1225)
-----------------
DNA (333bp)
protein (111aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_3
R_OD1_41_19, Parcubacteria, Bacteria

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1265..1921
-----------------
DNA (657bp)
protein (219aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
transcriptional repressor, LexA family (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] id=16758 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
LexA repressor
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_4
R_OD1_41_19, Parcubacteria, Bacteria

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1925..2626
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 = ATCC 33934 RepID=C9QKH3_VIBOR
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_5
R_OD1_41_19, Parcubacteria, Bacteria

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2729..2866
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_6
R_OD1_41_19, Parcubacteria, Bacteria

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2953..3489
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative uncharacterized protein id=2002600 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_7
R_OD1_41_19, Parcubacteria, Bacteria

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3647..5107
-----------------
DNA (1461bp)
protein (487aa)
ABC transporter family protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Uncharacterized ABC transporter ATP-binding protein ybiT id=3012797 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_8
R_OD1_41_19, Parcubacteria, Bacteria

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comp(5428..6651)
-----------------
DNA (1224bp)
protein (408aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=133565 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
multidrug ABC transporter substrate-binding protein
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_9
R_OD1_41_19, Parcubacteria, Bacteria

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comp(6648..7364)
-----------------
DNA (717bp)
protein (239aa)
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
ABC-type transport system id=4731803 bin=GWC2_OD1_43_27 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ABC transporter
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_10
R_OD1_41_19, Parcubacteria, Bacteria

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comp(7366..9168)
-----------------
DNA (1803bp)
protein (601aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=5802743 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
RND family efflux transporter MFP subunit
RIFCSPHIGHO2_02_OD1_41_19_rifcsphigho2_02_sub10_scaffold_759_11
R_OD1_41_19, Parcubacteria, Bacteria

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comp(9237..10088)
-----------------
DNA (852bp)
protein (284aa)
Integrase n=1 Tax=uncultured bacterium RepID=K2E8E1_9BACT
integrase Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
integrase
Displaying 11 items

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