ggKbase home page

rifcsphigho2_02_scaffold_1819

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_1819_1

Not on your lists

174..2354
-----------------
DNA (2181bp)
protein (727aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA37_9EURY id=5103115 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1819_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

2518..3723
-----------------
DNA (1206bp)
protein (402aa)
id=5049580 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_3
unknown

Not on your lists

3699..3887
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

3891..5063
-----------------
DNA (1173bp)
protein (391aa)
id=5049581 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_5

Not on your lists

5119..5553
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein
id=5049582 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_6
unknown

Not on your lists

5546..5722
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

5757..7418
-----------------
DNA (1662bp)
protein (554aa)
id=5049584 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_8
unknown

Not on your lists

7421..7801
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7779..8258
-----------------
DNA (480bp)
protein (160aa)
id=5049586 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8248..8814
-----------------
DNA (567bp)
protein (189aa)
id=5049587 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8801..9688
-----------------
DNA (888bp)
protein (296aa)
id=5049588 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1819_12
unknown

Not on your lists

9746..10018
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_13

Not on your lists

10085..11038
-----------------
DNA (954bp)
protein (318aa)
replication factor A; K07466 replication factor A1 id=5049589 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsphigho2_02_scaffold_1819_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11028..11501
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein; K07038 inner membrane protein id=5049593 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Membrane-bound metal-dependent hydrolase
rifcsphigho2_02_scaffold_1819_15

Not on your lists

11513..11977
-----------------
DNA (465bp)
protein (155aa)
PAP2 family protein id=5049594 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
membrane associated acid phosphatase
rifcsphigho2_02_scaffold_1819_16
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12008..12667
-----------------
DNA (660bp)
protein (220aa)
family 2 glycosyl transferase id=5049596 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferase, family GT2
rifcsphigho2_02_scaffold_1819_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12714..13280
-----------------
DNA (567bp)
protein (189aa)
zpr1-related zinc finger protein; K06874 zinc finger protein id=5050957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ZPR1-like protein zinc finger protein
rifcsphigho2_02_scaffold_1819_18
R_OP11_Levybacteria_38_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

13277..14077
-----------------
DNA (801bp)
protein (267aa)
ubiquinone/menaquinone methyltransferase (EC:2.1.1.-)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003737347
rifcsphigho2_02_scaffold_1819_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14074..14841)
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein id=5050955 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_1819_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(14902..15900)
-----------------
DNA (999bp)
protein (333aa)
ASCG--Diphthamide--biosynthesis--protein
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 id=5050954 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Diphthamide synthase, subunit DPH2
rifcsphigho2_02_scaffold_1819_21
unknown

Not on your lists


16040..17560
-----------------
DNA (1521bp)
protein (507aa)
ASCG--Glycyl-tRNA--synthetase
Putative tRNA synthetase class II core domain (G, H, P, S and T) n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141O9 RepID=B3T652_9ARCH id=5103040 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1819_22
unknown

Not on your lists

comp(17557..17670)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_23

Not on your lists

17799..18458
-----------------
DNA (660bp)
protein (220aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1819_24

Not on your lists

18455..18730
-----------------
DNA (276bp)
protein (92aa)
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_1819_25
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

18802..19350
-----------------
DNA (549bp)
protein (183aa)
NUDIX hydrolase n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X5B1_9ACTO id=87432 bin=ACD58 species=Streptomyces griseus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
rifcsphigho2_02_scaffold_1819_26
unknown

Not on your lists

19504..20133
-----------------
DNA (630bp)
protein (210aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_27
unknown

Not on your lists

20164..20586
-----------------
DNA (423bp)
protein (141aa)
Histidine triad (HIT) protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THN6_CALNY id=5103048 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine triad (HIT) protein
rifcsphigho2_02_scaffold_1819_trna_1
unknown

Not on your lists

20605..20677
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_1819_28
unknown

Not on your lists

comp(20712..21638)
-----------------
DNA (927bp)
protein (309aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1819_29
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21689..23374)
-----------------
DNA (1686bp)
protein (562aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C82BB
Transporter, CPA2 family
Displaying items 1-30 of 41 in total

View Taxonomy