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rifcsphigho2_02_scaffold_3184

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3184_1

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418..879
-----------------
DNA (462bp)
protein (154aa)
Marine sediment metagenome DNA, contig: S01H1_L02875 {ECO:0000313|EMBL:GAF82235.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_3184_2
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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1364..1816
-----------------
DNA (453bp)
protein (151aa)
Prevent-host-death family protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ETM3_9ARCH
inosine-5'-monophosphate dehydrogenase GuaB
Uncharacterized protein MJ0653; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain
rifcsphigho2_02_scaffold_3184_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1927..2892)
-----------------
DNA (966bp)
protein (322aa)
Carbohydrate kinase n=1 Tax=sediment metagenome RepID=D9PEX2_9ZZZZ
ribokinase family sugar kinase Tax=RBG_13_Woesearchaeota_36_6_curated
carbohydrate kinase PfkB
rifcsphigho2_02_scaffold_3184_4

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comp(2917..3354)
-----------------
DNA (438bp)
protein (146aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97907.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsphigho2_02_scaffold_3184_5

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comp(3502..4470)
-----------------
DNA (969bp)
protein (323aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97905.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsphigho2_02_scaffold_3184_6
unknown

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comp(4675..4803)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_7
CG_Woesearch_02, Woesearchaeota, Archaea

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4825..5199
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5045855 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_3184_8
unknown

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5271..6119
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_9

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6171..6575
-----------------
DNA (405bp)
protein (135aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsphigho2_02_scaffold_3184_10
CG_Woesearch_02, Woesearchaeota, Archaea

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6747..7922
-----------------
DNA (1176bp)
protein (392aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
peptidase M50 family Tax=CG_Woesearch_02
Peptidase M50
rifcsphigho2_02_scaffold_3184_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7902..8225)
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_3184_12
unknown

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8315..8623
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_13
AR18, Woesearchaeaota, DPANN, Archaea

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8610..8993
-----------------
DNA (384bp)
protein (128aa)
id=5048320 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_3184_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(9017..10402)
-----------------
DNA (1386bp)
protein (462aa)
uncharacterized LOC100567330 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_3184_15
AR11, Woesearchaeaota, DPANN, Archaea

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comp(10512..11930)
-----------------
DNA (1419bp)
protein (473aa)
glutamyl-tRNA(Gln) amidotransferase, A subunit; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=AR11
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3184_16

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comp(11927..12211)
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3184_17
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12324..13484)
-----------------
DNA (1161bp)
protein (387aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8Q0W1_METMA
Uncharacterized protein {ECO:0000313|EMBL:AKB24484.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
rifcsphigho2_02_scaffold_3184_18
unknown

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comp(13550..13861)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_19
Yarrowia lipolytica, Yarrowia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(13858..14418)
-----------------
DNA (561bp)
protein (187aa)
Inosine triphosphate pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_03148}; Short=ITPase {ECO:0000255|HAMAP-Rule:MF_03148};; Short=Inosine triphosphatase {ECO:0000255|HAMAP-Rule:MF_03148};; EC=3.6.1.19 {E
Inosine triphosphate pyrophosphatase n=1 Tax=Yarrowia lipolytica (strain CLIB 122 / E 150) RepID=ITPA_YARLI
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
rifcsphigho2_02_scaffold_3184_20
unknown

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14537..15673
-----------------
DNA (1137bp)
protein (379aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_21
unknown

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15730..16128
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_22
unknown

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comp(16129..17508)
-----------------
DNA (1380bp)
protein (460aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_23
AR15, Woesearchaeaota, DPANN, Archaea

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comp(17600..17989)
-----------------
DNA (390bp)
protein (130aa)
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_3184_24
AR15, Woesearchaeaota, DPANN, Archaea

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comp(18011..18244)
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_02_scaffold_3184_25
unknown

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comp(18466..19470)
-----------------
DNA (1005bp)
protein (335aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_26
AR17, Woesearchaeaota, DPANN, Archaea

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comp(19585..20697)
-----------------
DNA (1113bp)
protein (371aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368F066
RNA-directed DNA polymerase Tax=AR17
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_02_scaffold_3184_27
unknown

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comp(20720..20857)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_28
unknown

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comp(21003..21881)
-----------------
DNA (879bp)
protein (293aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3184_29
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(22036..23346)
-----------------
DNA (1311bp)
protein (437aa)
Small-conductance mechanosensitive channel
hypothetical protein id=18311231 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02533.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
rifcsphigho2_02_scaffold_3184_30
unknown

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comp(23315..23533)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

Displaying 30 items

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