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rifcsphigho2_02_scaffold_7796

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7796_1
unknown

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101..928
-----------------
DNA (828bp)
protein (276aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_2
unknown

Not on your lists

931..1641
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_3

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comp(1648..4239)
-----------------
DNA (2592bp)
protein (864aa)
ATP-dependent helicase Lhr and Lhr-like protein helicase {ECO:0000313|EMBL:KHO45167.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO45167.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsphigho2_02_scaffold_7796_4

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4794..5300
-----------------
DNA (507bp)
protein (169aa)
30S ribosomal protein S19e n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0Y9_FERPA
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ribosomal protein S19e
rifcsphigho2_02_scaffold_7796_5
CG_Woesearch_03, Woesearchaeota, Archaea

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5539..5712
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9
hypothetical protein
id=5103297 Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_7796_6
CG_Woesearch_01, Woesearchaeota, Archaea

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5714..6316
-----------------
DNA (603bp)
protein (201aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=CG_Woesearch_01
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsphigho2_02_scaffold_7796_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

6820..7824
-----------------
DNA (1005bp)
protein (335aa)
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable tRNA pseudouridine synthase B Tax=AR15
TruB; H/ACA RNA-protein complex component Cbf5p
rifcsphigho2_02_scaffold_7796_8

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comp(7806..8099)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54393.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_02_scaffold_7796_9
unknown

Not on your lists

comp(8096..8626)
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_10
CG_Woesearch_03, Woesearchaeota, Archaea

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8729..9118
-----------------
DNA (390bp)
protein (130aa)
Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_7796_trna_1
unknown

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9216..9333
-----------------
DNA (118bp)
transferRNA
rifcsphigho2_02_scaffold_7796_11
unknown

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comp(9416..9817)
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_12
unknown

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comp(9842..10099)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_13
unknown

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10186..10584
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_14

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10620..11906
-----------------
DNA (1287bp)
protein (429aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;"
Histidine-tRNA ligase
rifcsphigho2_02_scaffold_7796_15
unknown

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comp(11989..12768)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_16
AR15, Woesearchaeaota, DPANN, Archaea

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comp(12823..13704)
-----------------
DNA (882bp)
protein (294aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methionine aminopeptidase Tax=AR15
rifcsphigho2_02_scaffold_7796_17
unknown

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comp(13745..13873)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7796_18
unknown

Not on your lists

comp(13854..14288)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

Displaying 19 items

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