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rifcsphigho2_02_scaffold_2438

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2438_1
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2..994)
DNA (993bp) protein (331aa)
AMP phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5049544 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
AMP phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=AR18
thymidine phosphorylase
rifcsphigho2_02_scaffold_2438_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(978..1964)
DNA (987bp) protein (329aa)
hypothetical protein id=5049545 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_2438_3
unknown

Not on your lists

comp(2018..2749)
DNA (732bp) protein (244aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2438_4
unknown

Not on your lists

2880..3026
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2438_5
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3068..3724
DNA (657bp) protein (219aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=1435349 species="Bacteria; Bacteroidet
uridine/cytidine kinase n=1 Tax=Gillisia marina RepID=UPI00029AF370
udk; uridine kinase
rifcsphigho2_02_scaffold_2438_6

Not on your lists

comp(3721..4356)
DNA (636bp) protein (212aa)
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 id=5103441 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62722.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2438_7
unknown

Not on your lists

comp(4353..4568)
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2438_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4570..5376)
DNA (807bp) protein (269aa)
translation initiation factor, aIF-2BII family (EC:5.3.1.23); K03680 translation initiation factor eIF-2B subunit delta Tax=CG_Pacearch_06
translation initiation factor, aIF-2BII family (EC:5.3.1.23); K03680 translation initiation factor eIF-2B subunit delta id=5096039 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_2438_9
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5419..5682)
DNA (264bp) protein (88aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_2438_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5867..7258)
DNA (1392bp) protein (464aa)
id=5046880 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_2438_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7255..9573)
DNA (2319bp) protein (773aa)
id=5046879 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_2438_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9623..10216
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371D3FE
hypothetical protein; K07176 putative serine/threonine protein kinase Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsphigho2_02_scaffold_2438_13
unknown

Not on your lists

10365..10646
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2438_14
unknown

Not on your lists

comp(10649..11047)
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2438_15

Not on your lists

comp(11105..12424)
DNA (1320bp) protein (440aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5046875 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54268.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_02_scaffold_2438_16

Not on your lists

comp(12446..12832)
DNA (387bp) protein (129aa)
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit id=5046872 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Prefoldin subunit alpha
rifcsphigho2_02_scaffold_2438_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(12804..13085)
DNA (282bp) protein (94aa)
50S ribosomal protein L14 Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_2438_18
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(13082..13342)
DNA (261bp) protein (87aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6V029_9EURY
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
50S ribosomal protein L34
rifcsphigho2_02_scaffold_2438_19
unknown

Not on your lists

comp(13352..13795)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_2438_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13788..15188)
DNA (1401bp) protein (467aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5046863 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR18
Protein translocase subunit SecY
rifcsphigho2_02_scaffold_2438_21

Not on your lists


comp(15178..15639)
DNA (462bp) protein (154aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
rifcsphigho2_02_scaffold_2438_22

Not on your lists


comp(15639..16109)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CE9
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
50S ribosomal protein L30P
rifcsphigho2_02_scaffold_2438_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(16102..16824)
DNA (723bp) protein (241aa)
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5046859 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=AR18
30S ribosomal protein S5
rifcsphigho2_02_scaffold_2438_24
nanoarchaeote Nst1, Nanoarchaeota, Archaea

Not on your lists


comp(16821..17339)
DNA (519bp) protein (173aa)
50S ribosomal protein L18P n=1 Tax=nanoarchaeote Nst1 RepID=R1G9E4_9ARCH
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
LSU ribosomal protein L18P
rifcsphigho2_02_scaffold_2438_25
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(17336..17794)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381F97D
50S ribosomal protein L19
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanotherm
rifcsphigho2_02_scaffold_2438_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17791..18255)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037197A6
ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=CG_Woesearch_02
50S ribosomal protein L32e
rifcsphigho2_02_scaffold_2438_27

Not on your lists


comp(18258..18797)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Thermococcus sp. AM4 RepID=B7R341_9EURY
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12270.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
rifcsphigho2_02_scaffold_2438_28

Not on your lists


comp(18799..19191)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=3 Tax=Methanotorris RepID=RS8_METIG id=5103267 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
rifcsphigho2_02_scaffold_2438_29
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19201..19431)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5046853 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=AR18
SSU ribosomal protein S14P
rifcsphigho2_02_scaffold_2438_30

Not on your lists


comp(19431..19952)
DNA (522bp) protein (174aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12584.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
Displaying items 1-30 of 45 in total

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