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rifcsphigho2_02_scaffold_2648

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2648_1

Not on your lists

comp(191..940)
DNA (750bp) protein (250aa)
hypothetical protein; K04802 proliferating cell nuclear antigen id=5044991 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579376 species="Arch
DNA polymerase sliding clamp
rifcsphigho2_02_scaffold_2648_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(978..1412)
DNA (435bp) protein (145aa)
hypothetical protein
id=5044989 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_2648_3

Not on your lists

comp(1478..1744)
DNA (267bp) protein (89aa)
transcription termination factor Tfs; K03057 transcription elongation factor id=5044987 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcription termination factor Tfs
rifcsphigho2_02_scaffold_2648_4
unknown

Not on your lists

comp(1826..2245)
DNA (420bp) protein (140aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2648_5
CG_Pacearch_05, Pacearchaeota, Archaea

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2320..3222
DNA (903bp) protein (301aa)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:571 RepID=R5XP11_9CLOT
tRNA-U20-dihydrouridine synthase Tax=CG_Pacearch_05
dihydrouridine synthase
rifcsphigho2_02_scaffold_2648_6

Not on your lists

comp(3211..3663)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003638522
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62730.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2648_7
unknown

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comp(3740..4135)
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2648_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4198..5409)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI0003785495
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsphigho2_02_scaffold_2648_9

Not on your lists

comp(5399..6691)
DNA (1293bp) protein (431aa)
hypothetical protein
id=5045282 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54489.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_2648_10
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(6688..7362)
DNA (675bp) protein (225aa)
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_CPR10_03
ABC transporter, ATPase subunit; K02003 putative ABC transport system ATP-binding protein id=5047430 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter, ATP-binding protein
rifcsphigho2_02_scaffold_2648_11
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

comp(7489..10311)
DNA (2823bp) protein (941aa)
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=SYL_STAMF
Leucine--tRNA ligase {ECO:0000313|EMBL:KKK46294.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
rifcsphigho2_02_scaffold_2648_12

Not on your lists

comp(10355..11581)
DNA (1227bp) protein (409aa)
major facilitator superfamily MFS_1 id=5049607 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KHO53645.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
major facilitator superfamily MFS_1
rifcsphigho2_02_scaffold_2648_13
unknown

Not on your lists

comp(11808..12122)
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2648_trna_1
unknown

Not on your lists

12208..12309
DNA (102bp)
transferRNA
rifcsphigho2_02_scaffold_2648_14

Not on your lists

12318..12695
DNA (378bp) protein (126aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KHO55350.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KHO55350.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium botulinum B RepID=B2TQL9_CLOBB
N-acetylmuramoyl-L-alanine amidase
rifcsphigho2_02_scaffold_2648_15
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

12671..13204
DNA (534bp) protein (178aa)
UPI00021A58A9 related cluster id=5800731 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
UPI00021A58A9 related cluster Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_2648_16
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(13172..13615)
DNA (444bp) protein (148aa)
transmembrane_regions 20..42 Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_02_scaffold_2648_17
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(13701..13991)
DNA (291bp) protein (97aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AMV2_METOI
methylated-DNA/protein-cysteine methyltransferase
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:AEH06075.1}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" s
rifcsphigho2_02_scaffold_2648_18
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14017..15783)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376C4AB
hypothetical protein
Tax=AR20
rifcsphigho2_02_scaffold_2648_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15927..17156
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003758432
Radical SAM domain-containing protein Tax=AR17
Radical SAM domain protein
rifcsphigho2_02_scaffold_2648_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(17143..17655)
DNA (513bp) protein (171aa)
Marine sediment metagenome DNA, contig: S06H3_S17196 Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_2648_21

Not on your lists

17716..18222
DNA (507bp) protein (169aa)
id=5049620 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53658.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_2648_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18219..19097)
DNA (879bp) protein (293aa)
hypothetical protein id=5049621 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_2648_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19146..19436)
DNA (291bp) protein (97aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=AR4
ribosomal protein L12P Rpl12p
rifcsphigho2_02_scaffold_2648_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(19457..20386)
DNA (930bp) protein (310aa)
ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=5049624 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=AR18
Ribosomal protein L10
rifcsphigho2_02_scaffold_2648_25

Not on your lists


comp(20383..21051)
DNA (669bp) protein (223aa)
50S ribosomal protein L1P {ECO:0000313|EMBL:KHO52827.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L1
rifcsphigho2_02_scaffold_2648_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21119..21622)
DNA (504bp) protein (168aa)
id=5049640 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_2648_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

21713..22231
DNA (519bp) protein (173aa)
Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_2648_28

Not on your lists

comp(22228..23994)
DNA (1767bp) protein (589aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=157937
Glutamyl-tRNA(Gln) amidotransferase subunit E id=5800222 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
aspartyl-tRNA(Asn) amidotransferase subunit beta
rifcsphigho2_02_scaffold_2648_29

Not on your lists

24076..25872
DNA (1797bp) protein (599aa)
Minimal nucleotidyltransferase fused to HEPN domain n=1 Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH id=5103615 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Minimal nucleotidyltransferase fused to HEPN protein
Minimal nucleotidyltransferase fused to HEPN protein {ECO:0000313|EMBL:AJF62896.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying items 1-30 of 39 in total

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