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rifcsphigho2_02_scaffold_25518

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_25518_1
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1..426
-----------------
DNA (426bp)
protein (142aa)
MEMO1 family protein Ocepr_1790 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9S9_OCEP5
hypothetical protein
MEMO1 family protein Ocepr_1790 {ECO:0000256|HAMAP-Rule:MF_00055}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="O
rifcsphigho2_02_scaffold_25518_2
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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404..958
-----------------
DNA (555bp)
protein (185aa)
MEMO1 family protein N47_J06670 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGJ2_9DELT
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
rifcsphigho2_02_scaffold_25518_3
AR18, Woesearchaeaota, DPANN, Archaea

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955..1566
-----------------
DNA (612bp)
protein (204aa)
id=5046877 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_25518_4
AR17, Woesearchaeaota, DPANN, Archaea

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comp(1543..2313)
-----------------
DNA (771bp)
protein (257aa)
Tax=AR17
rifcsphigho2_02_scaffold_25518_5
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

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2424..2744
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D293
plastocyanin Tax=CG_Magasa_01
blue (type1) copper domain-containing protein
rifcsphigho2_02_scaffold_25518_6
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

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2741..3157
-----------------
DNA (417bp)
protein (139aa)
transmembrane_regions 9..27 Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
transmembrane_regions 9..27 id=69391 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rifcsphigho2_02_scaffold_25518_7
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3331..3786
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S15 n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A555_THEGJ
rps15p; 30S ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatoler
rifcsphigho2_02_scaffold_25518_8
CG_Woesearch_02, Woesearchaeota, Archaea

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3788..4363
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
30S ribosomal protein S3Ae Tax=CG_Woesearch_02
SSU ribosomal protein S3AE
rifcsphigho2_02_scaffold_25518_trna_1
unknown

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4400..4483
-----------------
DNA (84bp)
transferRNA
rifcsphigho2_02_scaffold_25518_9

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4531..5868
-----------------
DNA (1338bp)
protein (446aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_25518_10
unknown

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comp(5865..6233)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsphigho2_02_scaffold_25518_11

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6285..6893
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
Uncharacterized protein {ECO:0000313|EMBL:KKK79956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_25518_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6885..7118)
-----------------
DNA (234bp)
protein (78aa)
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN Tax=CG_Woesearch_01
Displaying 13 items

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