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rifcsphigho2_02_scaffold_1331

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1331_1
unknown

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_2
unknown

Not on your lists

comp(248..778)
DNA (531bp) protein (177aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_3
unknown

Not on your lists

897..2534
DNA (1638bp) protein (546aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2516..3646)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T800_9EURY
glycosyltransferase Tax=CG_Woesearch_01
glycosyltransferase
rifcsphigho2_02_scaffold_1331_5
unknown

Not on your lists

comp(3884..4696)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGL1_9EURY id=5103648 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGL1_9EURY Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_1331_6
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4881..5531
DNA (651bp) protein (217aa)
Probable thymidylate kinase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GB54_9CLOT
Probable thymidylate kinase {ECO:0000313|EMBL:CDE24614.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostri
rifcsphigho2_02_scaffold_1331_7
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(5535..5888)
DNA (354bp) protein (118aa)
id=5046614 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=CG_Micra_06
hypothetical protein
rifcsphigho2_02_scaffold_1331_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


6402..7556
DNA (1155bp) protein (385aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Pacearch_05
prolyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AB39E
rifcsphigho2_02_scaffold_1331_9
unknown

Not on your lists

7645..7803
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_10
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8117..8908)
DNA (792bp) protein (264aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=137998 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
thioredoxin reductase
rifcsphigho2_02_scaffold_1331_11
unknown

Not on your lists

8996..9166
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_12

Not on your lists

9198..9740
DNA (543bp) protein (181aa)
peptidase M50 family id=5044074 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50 family {ECO:0000313|EMBL:KHO54636.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
peptidase M50
rifcsphigho2_02_scaffold_1331_13

Not on your lists

comp(9729..10325)
DNA (597bp) protein (199aa)
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5044073 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
Transcription factor E
rifcsphigho2_02_scaffold_1331_14

Not on your lists

10454..10969
DNA (516bp) protein (172aa)
hypothetical protein
coiled-coil id=5044072 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54634.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_1331_15

Not on your lists

10972..11391
DNA (420bp) protein (140aa)
Marine sediment metagenome DNA, contig: S01H1_S08208 {ECO:0000313|EMBL:GAG06249.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_1331_16
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11394..11993)
DNA (600bp) protein (200aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=AR17
30S ribosomal protein S7
rifcsphigho2_02_scaffold_1331_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11990..12424)
DNA (435bp) protein (145aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5044114 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR18
30S ribosomal protein S12
rifcsphigho2_02_scaffold_1331_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12421..12831)
DNA (411bp) protein (137aa)
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5044118 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=AR18
NusA family KH domain-containing protein
rifcsphigho2_02_scaffold_1331_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12834..13085)
DNA (252bp) protein (84aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tax=AR18
rifcsphigho2_02_scaffold_1331_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13072..14202)
DNA (1131bp) protein (377aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5044120 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit A''
rifcsphigho2_02_scaffold_1331_21
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14192..16756)
DNA (2565bp) protein (855aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5044121 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase
rifcsphigho2_02_scaffold_1331_22

Not on your lists

comp(16756..18558)
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5044122 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-directed RNA polymerase
rifcsphigho2_02_scaffold_1331_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18559..20055)
DNA (1497bp) protein (499aa)
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5044123 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase
rifcsphigho2_02_scaffold_1331_24
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20048..20362)
DNA (315bp) protein (105aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Ther
DNA-directed RNA polymerase subunit H n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RPOH_PYRHO
rifcsphigho2_02_scaffold_1331_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


20711..21376
DNA (666bp) protein (222aa)
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5051509 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=AR18
fibrillarin
rifcsphigho2_02_scaffold_1331_26
unknown

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21333..21728
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21715..22899)
DNA (1185bp) protein (395aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_1331_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(22919..23500)
DNA (582bp) protein (194aa)
50S ribosomal protein L15; K02877 large subunit ribosomal protein L15e id=5044077 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15; K02877 large subunit ribosomal protein L15e Tax=AR18
50S ribosomal protein L15
rifcsphigho2_02_scaffold_1331_29
unknown

Not on your lists

23636..23776
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1331_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

23990..24775
DNA (786bp) protein (262aa)
hypothetical protein id=5044141 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
Displaying items 1-30 of 70 in total

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