ggKbase home page

rifcsphigho2_02_scaffold_1430_9

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_28_36

near complete RP 37 / 55 MC: 3 BSCG 12 / 51 ASCG 36 / 38
Location: comp(4608..5093)

Top 3 Functional Annotations

Value Algorithm Source
ASCG--Transcription--elongation--factor--Spt5 similarity ASCG
  • Identity: null
  • Coverage: null
  • Bit_score: null
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG id=5050965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 159.0
  • Bit_score: 225
  • Evalue 3.90e-56
LSU ribosomal protein L24A Rpl24A similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 155.0
  • Bit_score: 217
  • Evalue 2.30e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 486
ATGGAAACAAAAATTTATGCCATTAAAACAACAGCAAGTAGAGAAGAGCAGGTTATAGATTTTATAGAATCTAATGTTAAAAAGAAAAAGTTACAAGTATATTCTCTAATTACATCTCCAGGTATGAAGGGTTATATCTTTATAGAAACAATATCCGAAGATGAAGCAAAACAAGCATTTTTAGGTGTACCATATGCCAAGGGTATTCTTAATAAGCCCTTAGATTATAGAGAGATAGAACCTATGTTAGAACAAACCAAAGCAACAGTAAATATTCAAGAAAAAGATATAGTAGAGATAATTACAGGGCCATTTAAAAAAGAAAAAGCAAAGGTTAAAAGAATAGATGAACAAAAAGAAGAGGTAGTAGTAGAACTTTTAGAAGCAGCCATTCCAATACCAATTACTGTAAAAATAGATTCTATAAAGGTGATTAGAAGAGATGGAGAAGAAGATACAGAAGAAGAGGATAAAGAAAAAGAATAA
PROTEIN sequence
Length: 162
METKIYAIKTTASREEQVIDFIESNVKKKKLQVYSLITSPGMKGYIFIETISEDEAKQAFLGVPYAKGILNKPLDYREIEPMLEQTKATVNIQEKDIVEIITGPFKKEKAKVKRIDEQKEEVVVELLEAAIPIPITVKIDSIKVIRRDGEEDTEEEDKEKE*