ggKbase home page

rifcsphigho2_02_scaffold_1430

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_1430_1
unknown

Not on your lists

2..418
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379B0D2
rifcsphigho2_02_scaffold_1430_2
unknown

Not on your lists

509..1117
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

1152..1343
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D6311
rifcsphigho2_02_scaffold_1430_4

Not on your lists

1336..2238
-----------------
DNA (903bp)
protein (301aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28677_ARCFU id=5103886 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1430_5
unknown

Not on your lists

2275..2655
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_6

Not on your lists

2652..3128
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3INE5_9PLAN id=5103885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1430_trna_1
unknown

Not on your lists

3152..3225
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_1430_7

Not on your lists

comp(3227..3871)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364237D
hypothetical protein
rifcsphigho2_02_scaffold_1430_8

Not on your lists


comp(3902..4576)
-----------------
DNA (675bp)
protein (225aa)
BSCG--ribosomal--protein--L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5050963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein L11P
rifcsphigho2_02_scaffold_1430_9

Not on your lists


comp(4608..5093)
-----------------
DNA (486bp)
protein (162aa)
ASCG--Transcription--elongation--factor--Spt5
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG id=5050965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_1430_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5133..5330)
-----------------
DNA (198bp)
protein (66aa)
Preprotein translocase subunit SecE id=5050966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Preprotein translocase subunit secE
rifcsphigho2_02_scaffold_1430_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5360..6478)
-----------------
DNA (1119bp)
protein (373aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=5050968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Cell division protein FtsZ
rifcsphigho2_02_scaffold_1430_12

Not on your lists

comp(6514..7170)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6AAC
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_1430_13
unknown

Not on your lists

comp(7201..7842)
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_14

Not on your lists


7938..8330
-----------------
DNA (393bp)
protein (131aa)
ASCG--Translation--initiation--factor--5A
translation initiation factor eIF-5A; K03263 translation initiation factor 5A id=5050970 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 5A
rifcsphigho2_02_scaffold_1430_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

8340..8507
-----------------
DNA (168bp)
protein (56aa)
hypothetical protein
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1430_16
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8543..9736
-----------------
DNA (1194bp)
protein (398aa)
peptidase m50 id=5050972 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50
rifcsphigho2_02_scaffold_1430_17
unknown

Not on your lists

9897..9989
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

10098..10901
-----------------
DNA (804bp)
protein (268aa)
Hydrolase, TatD family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV id=5103022 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hydrolase, TatD family
rifcsphigho2_02_scaffold_1430_19
unknown

Not on your lists

comp(11011..11598)
-----------------
DNA (588bp)
protein (196aa)
Metallophosphoesterase n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWC7_9EURY id=5103021 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallophosphoesterase
rifcsphigho2_02_scaffold_1430_20
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11649..12659
-----------------
DNA (1011bp)
protein (337aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IGI5_THETR
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
rifcsphigho2_02_scaffold_1430_21
unknown

Not on your lists

comp(12636..12791)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12970..14043)
-----------------
DNA (1074bp)
protein (358aa)
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 id=5050980 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ORC1-type DNA replication protein
rifcsphigho2_02_scaffold_1430_23
unknown

Not on your lists

comp(14176..14508)
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_24
unknown

Not on your lists

14637..14801
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_25
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14801..15058
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C8224
rifcsphigho2_02_scaffold_1430_26
unknown

Not on your lists

comp(15093..15482)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_27
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

15701..17080
-----------------
DNA (1380bp)
protein (460aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PD83_DEFDS
TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase
rifcsphigho2_02_scaffold_1430_28
unknown

Not on your lists

comp(17070..17483)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1430_29
unknown

Not on your lists

comp(17865..18260)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

Displaying items 1-30 of 79 in total

View Taxonomy