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rifcsphigho2_02_scaffold_633

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_633_1
unknown

Not on your lists

comp(1..693)
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

rifcsphigho2_02_scaffold_633_2
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(690..3425)
-----------------
DNA (2736bp)
protein (912aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1QBX6_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC28649.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" sour
SNF2-like protein
rifcsphigho2_02_scaffold_633_3
unknown

Not on your lists

comp(3573..4001)
-----------------
DNA (429bp)
protein (143aa)
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT id=5103482 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT Tax=AR20
Heat shock protein Hsp20
rifcsphigho2_02_scaffold_633_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4217..4624)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein
Putative uncharacterized protein id=3526825 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein; K09152 hypothetical protein Tax=AR5
rifcsphigho2_02_scaffold_633_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4880..5143)
-----------------
DNA (264bp)
protein (88aa)
UPF0147 protein Mfer_0926 id=3526822 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein; K09721 hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_02_scaffold_633_6
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5290..5628)
-----------------
DNA (339bp)
protein (113aa)
Prefoldin subunit beta id=3526819 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
prefoldin subunit beta
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeogloba
rifcsphigho2_02_scaffold_633_7
unknown

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comp(5828..5995)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsphigho2_02_scaffold_633_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6279..6464)
-----------------
DNA (186bp)
protein (62aa)
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae id=18248910 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=AR5
50S ribosomal protein L37Ae
rifcsphigho2_02_scaffold_633_9

Not on your lists

6510..7295
-----------------
DNA (786bp)
protein (262aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] id=18248897 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=1579367 specie
diphthine synthase
rifcsphigho2_02_scaffold_633_10
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7480..8277
-----------------
DNA (798bp)
protein (266aa)
Agmatinase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RC27_9EURY
agmatinase
Agmatinase {ECO:0000313|EMBL:AFK21787.1}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
rifcsphigho2_02_scaffold_633_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8264..8914
-----------------
DNA (651bp)
protein (217aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Beggiatoa alba B18LD RepID=I3CIG6_9GAMM
Methyltransferase family protein {ECO:0000313|EMBL:KCZ70523.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoper
hypothetical protein
rifcsphigho2_02_scaffold_633_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8949..9905
-----------------
DNA (957bp)
protein (319aa)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] id=5051062 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] Tax=AR18
glycosyl transferase family protein
rifcsphigho2_02_scaffold_633_13
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

9902..10750
-----------------
DNA (849bp)
protein (283aa)
Glycosyltransferase, probably involved in cell wall biogenesis Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
putative glycosyltransferase id=5051052 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_633_14
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10818..11564)
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0W861_9FLAO
hypothetical protein; K09144 hypothetical protein Tax=CG_Elusi_05
CRISPR-associated Csx11 family protein
rifcsphigho2_02_scaffold_633_15
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

comp(11551..12279)
-----------------
DNA (729bp)
protein (243aa)
Uncharacterized protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F6I2_THELT
transcriptional regulator Tax=GWA2_OP3_50_21_curated
hypothetical protein
rifcsphigho2_02_scaffold_633_16
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

12642..13367
-----------------
DNA (726bp)
protein (242aa)
Glycosyl transferase family 2 n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NVQ4_9FIRM
family 2 glycosyl transferase Tax=RBG_13_WOR_2_41_10_curated
glycosyl transferase family 2
rifcsphigho2_02_scaffold_633_17

Not on your lists

13369..13908
-----------------
DNA (540bp)
protein (180aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EEC7_9EURY
Marine sediment metagenome DNA, contig: S03H2_S13885 {ECO:0000313|EMBL:GAH62647.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transferase hexapeptide repeat containing protein
rifcsphigho2_02_scaffold_633_18

Not on your lists

13912..14976
-----------------
DNA (1065bp)
protein (355aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D2F2_METSW
Uncharacterized protein {ECO:0000313|EMBL:CEG13134.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
rifcsphigho2_02_scaffold_633_19
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14984..15958
-----------------
DNA (975bp)
protein (325aa)
oxidoreductase protein
oxidoreductase domain-containing protein id=5241153 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=BJP_08E140C01_Anaerolineales_40_8
rifcsphigho2_02_scaffold_633_20
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15963..17216
-----------------
DNA (1254bp)
protein (418aa)
nucleotide sugar dehydrogenase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI0002887632
UDP-N-acetyl-D-glucosamine 6-dehydrogenase {ECO:0000313|EMBL:CDQ41097.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5
nucleotide sugar dehydrogenase
rifcsphigho2_02_scaffold_633_21
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17213..17839
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-O17 RepID=UPI000362A8F3
LmbE family protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
rifcsphigho2_02_scaffold_633_22
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

17824..18498
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWU9_METPS
WbqC-like family protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
hypothetical protein
rifcsphigho2_02_scaffold_633_23
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18507..19601
-----------------
DNA (1095bp)
protein (365aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABE52899.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABE52899.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methano
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UH7_METBU
rifcsphigho2_02_scaffold_633_24
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

19598..21010
-----------------
DNA (1413bp)
protein (471aa)
rdhI; radical SAM/B12 binding domain-containing protein Tax=RBG_13_RIF_OD1_08_37_53_curated
radical SAM domain-containing protein id=5043078 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
radical SAM protein
rifcsphigho2_02_scaffold_633_25

Not on your lists

21012..22613
-----------------
DNA (1602bp)
protein (534aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase
Uncharacterized protein {ECO:0000313|EMBL:KKL87619.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5045897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_633_26

Not on your lists

22663..23358
-----------------
DNA (696bp)
protein (232aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
Putative N-acylneuraminate cytidylyltransferase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CJU4_9FIRM
Marine sediment metagenome DNA, contig: S06H3_L03979 {ECO:0000313|EMBL:GAI03486.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_633_27
Methanococcus aeolicus, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

23355..24389
-----------------
DNA (1035bp)
protein (345aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase {ECO:0000313|EMBL:ABR56006.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ABR56006.1};; TaxID=419665 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; M
N-acetylneuraminate synthase n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UU34_META3
rifcsphigho2_02_scaffold_633_28

Not on your lists

24386..25537
-----------------
DNA (1152bp)
protein (384aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:CEG12898.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CEG12898.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTI5_CLOBO
rifcsphigho2_02_scaffold_633_29
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

25534..27123
-----------------
DNA (1590bp)
protein (530aa)
radical SAM family Fe-S protein (EC:1.14.13.81); K04035 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] Tax=CG_Woesearch_01
radical SAM family Fe-S protein (EC:1.14.13.81)
Radical SAM protein with Cobalamin (Vitamin B12)-binding domain id=4564582 bin=GWF2_Lentisphaerae_52_8 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rifcsphigho2_02_scaffold_633_30
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27128..28528
-----------------
DNA (1401bp)
protein (467aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00036F4240
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
Displaying items 1-30 of 54 in total

View Taxonomy