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rifcsphigho2_02_scaffold_6281

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_6281_1
unknown

Not on your lists

comp(2..70)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6281_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

228..680
-----------------
DNA (453bp)
protein (151aa)
id=3733854 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_6281_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

763..1350
-----------------
DNA (588bp)
protein (196aa)
Putative uncharacterized protein (Fragment) id=3733856 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_6281_4
unknown

Not on your lists

1416..1850
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6281_5
unknown

Not on your lists

1847..2725
-----------------
DNA (879bp)
protein (293aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6281_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

2727..4214
-----------------
DNA (1488bp)
protein (496aa)
hypothetical protein; K07332 archaeal flagellar protein FlaI id=18248745 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_02_scaffold_6281_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

4211..5077
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein id=3733861 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
type II secretion system F domain-containing protein
rifcsphigho2_02_scaffold_6281_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5079..6011
-----------------
DNA (933bp)
protein (311aa)
gsp-4; putative type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248742 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
gsp-9; putative type II secretion system protein
rifcsphigho2_02_scaffold_6281_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

6465..6947
-----------------
DNA (483bp)
protein (161aa)
transmembrane_regions id=18248741 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_6281_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

6944..8164
-----------------
DNA (1221bp)
protein (407aa)
transmembrane_regions id=18248740 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_6281_11

Not on your lists

8223..8657
-----------------
DNA (435bp)
protein (145aa)
putative pyrophosphohydrolase id=131798 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
pyrophosphohydrolase
rifcsphigho2_02_scaffold_6281_12
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8650..9750)
-----------------
DNA (1101bp)
protein (367aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYX2_METFV
amidohydrolase
rifcsphigho2_02_scaffold_6281_13
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(9737..9940)
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F1305
amidohydrolase
rifcsphigho2_02_scaffold_6281_14
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(9955..10686)
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
Transcriptional regulator, TrmB
rifcsphigho2_02_scaffold_6281_15
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10753..11430
-----------------
DNA (678bp)
protein (226aa)
Cytidylate kinase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HL76_PYRSN
cytidylate kinase
rifcsphigho2_02_scaffold_6281_16
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11432..12004
-----------------
DNA (573bp)
protein (191aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Lyngbya aestuarii BL J RepID=U7QTT8_9CYAN
rifcsphigho2_02_scaffold_6281_17
unknown

Not on your lists

12076..12267
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6281_18
unknown

Not on your lists

12306..12857
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6281_19
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

12916..13203
-----------------
DNA (288bp)
protein (96aa)
Translation initiation factor 1A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR6_METFV
translation initiation factor 1a (aeif-1a)
rifcsphigho2_02_scaffold_6281_20

Not on your lists

13361..14599
-----------------
DNA (1239bp)
protein (413aa)
Aromatic amino acid aminotransferase id=3501601 bin=GWA1_ZB2_49_26 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
class I/II aminotransferase
rifcsphigho2_02_scaffold_6281_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


14800..15315
-----------------
DNA (516bp)
protein (172aa)
ASCG--KH--type--1--domain--protein
RNA-processing protein; K06961 ribosomal RNA assembly protein id=18248736 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
KH domain-containing protein
rifcsphigho2_02_scaffold_6281_22

Not on your lists

15441..16190
-----------------
DNA (750bp)
protein (250aa)
Displaying 22 items

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