ggKbase home page

rifcsphigho2_02_scaffold_6970

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6970_1

Not on your lists

comp(118..507)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377A31C
Uncharacterized protein {ECO:0000313|EMBL:AJF61741.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_6970_2
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(517..711)
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z9V3_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT36130.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
rifcsphigho2_02_scaffold_6970_3
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

1049..1228
-----------------
DNA (180bp)
protein (60aa)
hypothetical protein
Putative uncharacterized protein Tax=GWB1_OD1_49_6_curated
id=5103357 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_6970_4
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(1339..2037)
-----------------
DNA (699bp)
protein (233aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ge
M4C-methyltransferase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YC28_DICT6
DNA modification methylase
rifcsphigho2_02_scaffold_6970_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2159..2824
-----------------
DNA (666bp)
protein (222aa)
Glycosyltransferase, group 2 family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FBE2_9DELT
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_6970_6
unknown

Not on your lists

comp(3043..3549)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3711..4451
-----------------
DNA (741bp)
protein (247aa)
transcriptional regulator TrmB id=18248243 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transcriptional regulator TrmB Tax=AR5
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_6970_8
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

Not on your lists

comp(4628..6673)
-----------------
DNA (2046bp)
protein (682aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B38731
membrane protein Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
membrane protein
rifcsphigho2_02_scaffold_6970_9
unknown

Not on your lists

6895..7152
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_10
unknown

Not on your lists

comp(7312..7737)
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_11
unknown

Not on your lists

comp(7801..8184)
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_12
unknown

Not on your lists

8269..8553
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_13
unknown

Not on your lists

8554..8670
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8706..10550)
-----------------
DNA (1845bp)
protein (615aa)
Putative PilT protein domain protein id=4687387 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PilT protein domain-containing protein Tax=AR5
hypothetical protein
rifcsphigho2_02_scaffold_6970_15
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(10617..11258)
-----------------
DNA (642bp)
protein (214aa)
Tax=RBG_13_RIF_OD1_08_37_53_curated
rifcsphigho2_02_scaffold_6970_16
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11312..12358
-----------------
DNA (1047bp)
protein (349aa)
Small-conductance mechanosensitive channel n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7F6_METCZ
mscS-4; Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AFD00822.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Met
rifcsphigho2_02_scaffold_6970_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(12400..13680)
-----------------
DNA (1281bp)
protein (427aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hypothetical protein id=18248773 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
rifcsphigho2_02_scaffold_6970_18
R_OP11_Gottesmanbacteria_39_14, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(13718..14872)
-----------------
DNA (1155bp)
protein (385aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_14_curated
Histidinol-phosphate aminotransferase n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MTE3_9THEO
histidinol-phosphate aminotransferase
rifcsphigho2_02_scaffold_6970_19
unknown

Not on your lists

comp(14878..15141)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_20
unknown

Not on your lists

comp(15144..15356)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6970_21
unknown

Not on your lists

comp(15401..15475)
-----------------
DNA (75bp)
protein (25aa)

This feature has no annotations

Displaying 21 items

View Taxonomy