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rifcsphigho2_02_scaffold_4343

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4343_1

Not on your lists

293..913
-----------------
DNA (621bp)
protein (207aa)
malate dehydrogenase oxaloacetate-decarboxylating (EC:1.1.1.38)
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=5241604 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Malate dehydrogenase oxaloacetate-decarboxylating {ECO:0000313|EMBL:AJF60595.1}; EC=1.1.1.38 {ECO:0000313|EMBL:AJF60595.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_4343_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1051..2319)
-----------------
DNA (1269bp)
protein (423aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=RBG_16_Micrarchaeota_36_9_curated
Elongation factor 1-alpha id=4010240 bin=PER_GWC2_41_7 species=unknown genus=Thermoplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
translation elongation factor EF-1 alpha
rifcsphigho2_02_scaffold_4343_3
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

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2428..3120
-----------------
DNA (693bp)
protein (231aa)
Putative DNA alkylation repair enzyme Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
hypothetical protein id=3936 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
DNA alkylation repair enzyme superfamily
rifcsphigho2_02_scaffold_4343_4
unknown

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3146..3304
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_5
unknown

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3586..4179
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_6
AR10, Diapherotrites, DPANN, Archaea

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comp(4465..5565)
-----------------
DNA (1101bp)
protein (367aa)
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase id=5241071 bin=GW2011_AR10_complete species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
NAD-dependent epimerase/dehydratase Tax=AR10
rifcsphigho2_02_scaffold_4343_7
unknown

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comp(5562..5651)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_8
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5648..5941)
-----------------
DNA (294bp)
protein (98aa)
DNA polymerase, beta domain protein region n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LNN4_THEM4
Putative nucleotidyltransferase {ECO:0000313|EMBL:AKG92150.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
DNA polymerase subunit beta
rifcsphigho2_02_scaffold_4343_9
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(6021..6932)
-----------------
DNA (912bp)
protein (304aa)
UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:BAJ47293.1}; EC=2.7.7.9 {ECO:0000313|EMBL:BAJ47293.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candi
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4S4_9ARCH
rifcsphigho2_02_scaffold_4343_10
RHI_OD1_Adlerbacteria_53_18, Adlerbacteria, Parcubacteria, Bacteria

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comp(7002..7412)
-----------------
DNA (411bp)
protein (137aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPHIGHO2_12_FULL_OD1_Adlerbacteria_53_18_curated
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Pelagibacter ubique RepID=UPI0003B38617
rifcsphigho2_02_scaffold_4343_11
AR5, Aenigmarchaeota, DPANN, Archaea

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7424..7729
-----------------
DNA (306bp)
protein (102aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=18248183 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=AR5
glutamyl-tRNA(Gln) amidotransferase subunit C
rifcsphigho2_02_scaffold_4343_12
AR5, Aenigmarchaeota, DPANN, Archaea

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7729..9123
-----------------
DNA (1395bp)
protein (465aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) id=18248185 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) Tax=AR5
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
rifcsphigho2_02_scaffold_4343_13
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9199..10197)
-----------------
DNA (999bp)
protein (333aa)
Glycosyl transferase family 2 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L215_9EURY
glycosyl transferase
Tax=BJP_S1_SUB10_Methanoculleus_61_9
rifcsphigho2_02_scaffold_4343_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10209..11597
-----------------
DNA (1389bp)
protein (463aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=AR5
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=4203362 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
glutamyl-tRNA(Gln) amidotransferase subunit beta
rifcsphigho2_02_scaffold_4343_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12080..13744
-----------------
DNA (1665bp)
protein (555aa)
ATPase, type IV secretory pathway VirB11 component like protein id=18248121 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ATPase, type IV secretory pathway VirB11 component like protein Tax=AR5
ATPase, type IV secretory pathway VirB11 component like protein
rifcsphigho2_02_scaffold_4343_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13747..14625
-----------------
DNA (879bp)
protein (293aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248123 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=AR5
putative type II secretion system F domain protein
rifcsphigho2_02_scaffold_4343_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14635..15444
-----------------
DNA (810bp)
protein (270aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248124 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=AR5
type II secretion system F domain-containing protein
rifcsphigho2_02_scaffold_4343_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15459..15836)
-----------------
DNA (378bp)
protein (126aa)
Metallopeptidase-like protein id=3673925 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallopeptidase Tax=RBG_16_Deltaproteobacteria_54_11_curated
metallopeptidase-like protein
rifcsphigho2_02_scaffold_4343_19
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(15860..16765)
-----------------
DNA (906bp)
protein (302aa)
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=18248241 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=AR5
rnz; Ribonuclease Z (EC:3.1.26.11)
rifcsphigho2_02_scaffold_4343_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16816..17310
-----------------
DNA (495bp)
protein (165aa)
Archaeal flagellin, N-terminal id=18248159 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Archaeal flagellin, N-terminal Tax=AR5
rifcsphigho2_02_scaffold_4343_21
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(17377..18282)
-----------------
DNA (906bp)
protein (302aa)
NAD-dependent epimerase/dehydratase id=18248636 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
NAD-dependent epimerase/dehydratase Tax=AR5
NAD-dependent epimerase/dehydratase
rifcsphigho2_02_scaffold_4343_22
unknown

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18655..19098
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_23
unknown

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19197..19622
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_24
unknown

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19665..19958
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_25
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(20304..24416)
-----------------
DNA (4113bp)
protein (1371aa)
Putative uncharacterized protein (Fragment) id=4761624 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein Tax=AR5
rifcsphigho2_02_scaffold_4343_26
unknown

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comp(24429..26108)
-----------------
DNA (1680bp)
protein (560aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_27
unknown

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comp(26342..27634)
-----------------
DNA (1293bp)
protein (431aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_28
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(27651..29162)
-----------------
DNA (1512bp)
protein (504aa)
Copper amine oxidase domain protein n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T674_THEIA
copper amine oxidase domain-containing protein
Copper amine oxidase domain-containing protein {ECO:0000313|EMBL:AIS53445.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.
rifcsphigho2_02_scaffold_4343_29
unknown

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comp(29172..30569)
-----------------
DNA (1398bp)
protein (466aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4343_30
unknown

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30617..31069
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

Displaying 30 items

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