ggKbase home page

rifcsphigho2_02_scaffold_4598

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4598_1

Not on your lists

comp(118..1560)
-----------------
DNA (1443bp)
protein (481aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B81CA
Uncharacterized protein {ECO:0000313|EMBL:KHO48902.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
glycosyl transferase 39
rifcsphigho2_02_scaffold_4598_2
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(1622..3154)
-----------------
DNA (1533bp)
protein (511aa)
dolichyl-phosphate-mannose-protein mannosyltransferase (EC:2.4.1.109)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=CG_Omnitr_06
glycosyl transferase family protein id=18248626 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_4598_3
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

3251..4150
-----------------
DNA (900bp)
protein (300aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B312_9BACT
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_13_WOR-2_44_8b_curated
type 11 methyltransferase
rifcsphigho2_02_scaffold_4598_4

Not on your lists

comp(4237..4938)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN36310.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Protein containing methyltransferase domain id=4408214 bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
type 11 methyltransferase
rifcsphigho2_02_scaffold_4598_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4970..5665
-----------------
DNA (696bp)
protein (232aa)
Glucosyltransferase (Family 2) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7G5_UNCMA
Glycosyl transferase {ECO:0000313|EMBL:KCZ71869.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" sou
glucosyltransferase
rifcsphigho2_02_scaffold_4598_6
Hanseniaspora uvarum, Hanseniaspora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

5671..7044
-----------------
DNA (1374bp)
protein (458aa)
GPI mannosyltransferase 1 {ECO:0000313|EMBL:KKA03530.1}; TaxID=1246595 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycodaceae; Hanseni
rifcsphigho2_02_scaffold_4598_7
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(7045..8433)
-----------------
DNA (1389bp)
protein (463aa)
radical SAM domain-containing protein Tax=RBG_16_Chloroflexi_50_9_curated
radical SAM domain-containing protein id=5049560 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
B12 binding/radical SAM domain-containing protein
rifcsphigho2_02_scaffold_4598_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(8435..9883)
-----------------
DNA (1449bp)
protein (483aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362EC4C
radical SAM domain-containing protein Tax=RBG_13_Chloroflexi_50_10_curated
radical SAM protein
rifcsphigho2_02_scaffold_4598_9
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9926..10762)
-----------------
DNA (837bp)
protein (279aa)
Methyltransferase FkbM n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY92_9ARCH
Methyltransferase FkbM {ECO:0000313|EMBL:EGP92870.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
FkbM family methyltransferase
rifcsphigho2_02_scaffold_4598_10
GWB1_OP11_44_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10786..11451)
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT35064.1}; TaxID=1618447 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_44_11c.;"
Uncharacterized protein id=2209335 bin=GWB2_Elusimicrobium_63_22 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
type 11 methyltransferase
rifcsphigho2_02_scaffold_4598_11
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(11405..12553)
-----------------
DNA (1149bp)
protein (383aa)
phosphatidylinositol glycan-class A Tax=CG_Micra_05
Glycosyl transferase group 1 id=4022652 bin=GWF2_OP9_related_35_9 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
glycosyl transferase GT4 family
rifcsphigho2_02_scaffold_4598_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12555..14162)
-----------------
DNA (1608bp)
protein (536aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55019.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
rifcsphigho2_02_scaffold_4598_13
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14167..15321)
-----------------
DNA (1155bp)
protein (385aa)
Glycosyl transferase group 1 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY23_HERA2
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABX06905.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aur
rifcsphigho2_02_scaffold_4598_trna_1
unknown

Not on your lists

comp(15548..15632)
-----------------
DNA (85bp)
transferRNA
rifcsphigho2_02_scaffold_4598_14
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

15771..15992
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein
id=2898912 Tax=RBG_16_Micrarchaeota_49_10_curated
id=2898912 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_4598_15
GWC2_OD1_52_8, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16264..16494)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein
Uncharacterized conserved protein id=4649185 bin=GWA2_OP3_52_12 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Uncharacterized protein {ECO:0000313|EMBL:KKW29970.1}; TaxID=1618676 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_52_8b.;"
rifcsphigho2_02_scaffold_4598_16
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(16646..17269)
-----------------
DNA (624bp)
protein (208aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PIMT_METKA
pcm; protein-L-isoaspartate O-methyltransferase
rifcsphigho2_02_scaffold_4598_17
unknown

Not on your lists

comp(17300..18052)
-----------------
DNA (753bp)
protein (251aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4598_18
unknown

Not on your lists

comp(18087..19229)
-----------------
DNA (1143bp)
protein (381aa)

This feature has no annotations

Displaying 19 items

View Taxonomy