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rifcsphigho2_02_scaffold_3144

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3144_1
unknown

Not on your lists

57..260
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_2
unknown

Not on your lists

590..910
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_3
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(914..1906)
-----------------
DNA (993bp)
protein (331aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=573064 species="Archaea; Eu
Protein pelota homolog n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P7M8_METFA
translation factor pelota
rifcsphigho2_02_scaffold_3144_4
unknown

Not on your lists

1973..3097
-----------------
DNA (1125bp)
protein (375aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_5
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

3213..4448
-----------------
DNA (1236bp)
protein (412aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative {ECO:0000313|EMBL:AEA47210.1}; EC=1.1.1.88 {ECO:0000313|EMBL:AEA47210.1};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales;
Hydroxymethylglutaryl-CoA reductase, degradative n=2 Tax=Archaeoglobus veneficus RepID=F2KML3_ARCVS
rifcsphigho2_02_scaffold_3144_6
unknown

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comp(4483..4863)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_7
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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4996..5241
-----------------
DNA (246bp)
protein (82aa)
Putative uncharacterized protein id=4010366 bin=PER_GWC2_41_7 species=uncultured archaeon GZfos33H6 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein id=4010366 bin=PER_GWC2_41_7 species=uncultured archaeon GZfos33H6 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_3144_8
unknown

Not on your lists

5736..5954
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_9
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

6063..8924
-----------------
DNA (2862bp)
protein (954aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5043974 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase Tax=CG_Micra_04
rifcsphigho2_02_scaffold_3144_10
unknown

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9013..9402
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9444..10499)
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein
phosphoesterase RecJ domain protein id=18248765 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
phosphoesterase RecJ domain protein Tax=AR5
rifcsphigho2_02_scaffold_3144_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(10532..11377)
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein
Putative lysophospholipase id=5240950 bin=GW2011_AR10_complete species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative lysophospholipase Tax=AR10
rifcsphigho2_02_scaffold_3144_13
unknown

Not on your lists

11542..12144
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12176..12766
-----------------
DNA (591bp)
protein (197aa)
protoporphyrinogen oxidase HemK id=18248945 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
protoporphyrinogen oxidase HemK Tax=AR5
protoporphyrinogen oxidase
rifcsphigho2_02_scaffold_3144_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12776..13567
-----------------
DNA (792bp)
protein (264aa)
GTPase; K06944 id=18248943 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
GTPase; K06944 Tax=AR5
putative GTPase of the OBG/HflX superfamily
rifcsphigho2_02_scaffold_3144_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13603..14094
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN32803.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
rifcsphigho2_02_scaffold_3144_17

Not on your lists

14094..14402
-----------------
DNA (309bp)
protein (103aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J966_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38646.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
rifcsphigho2_02_scaffold_3144_18
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14448..15731)
-----------------
DNA (1284bp)
protein (428aa)
Mn transporter n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B31DF3 rbh
mn transporter
Mn transporter {ECO:0000313|EMBL:ADV46241.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM
rifcsphigho2_02_scaffold_3144_19
unknown

Not on your lists

comp(15883..16002)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_20
unknown

Not on your lists

comp(16155..16994)
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_21

Not on your lists

comp(17143..17481)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein id=5049201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45192.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_3144_22
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

17570..17842
-----------------
DNA (273bp)
protein (91aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141M18 RepID=B3T605_9ARCH
Putative pterin-4-alpha-carbinolamine dehydratase Tax=GWA2_OD1_47_10
hypothetical protein
rifcsphigho2_02_scaffold_3144_23
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(17857..19539)
-----------------
DNA (1683bp)
protein (561aa)
thrS; putative threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Pacearch_05
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035CC481
rifcsphigho2_02_scaffold_3144_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

19812..20405
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5040651 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=AR5
hypothetical protein
rifcsphigho2_02_scaffold_3144_trna_1
unknown

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19814..19881
-----------------
DNA (68bp)
transferRNA
rifcsphigho2_02_scaffold_3144_25
unknown

Not on your lists

20421..21197
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3144_trna_2
unknown

Not on your lists

comp(21389..21474)
-----------------
DNA (86bp)
transferRNA
rifcsphigho2_02_scaffold_3144_26
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(21643..22809)
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsphigho2_02_scaffold_3144_27
unknown

Not on your lists

22852..23580
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

Displaying 29 items

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