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rifcsphigho2_02_scaffold_12879

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12879_1
unknown

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205..993
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12879_2
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1059..2000)
-----------------
DNA (942bp)
protein (314aa)
Replication factor C small subunit n=2 Tax=Euryarchaeota RepID=M9SI21_9EURY
Replication factor C small subunit
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12
rifcsphigho2_02_scaffold_12879_3
unknown

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2095..2640
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12879_4
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2686..4083
-----------------
DNA (1398bp)
protein (466aa)
lysC; aspartokinase LysC (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;
Aspartokinase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VND7_CLOSH
rifcsphigho2_02_scaffold_12879_5
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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4286..5035
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719623
zinc/iron permease Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_12879_6
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5079..6029)
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y8U6_9PROT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
hypothetical protein
rifcsphigho2_02_scaffold_12879_7

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6156..7244
-----------------
DNA (1089bp)
protein (363aa)
Glutamate dehydrogenase (NAD(P)+) id=4845865 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Glutamate dehydrogenase (NADP)+
rifcsphigho2_02_scaffold_12879_8
GWA2_OP11_nov_40_9, Daviesbacteria, Microgenomates, Bacteria

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7379..7603
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EB014
Transposase IS200-like protein {ECO:0000313|EMBL:KKR83276.1}; TaxID=1618424 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_40_9.;"
rifcsphigho2_02_scaffold_12879_9
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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8029..8490
-----------------
DNA (462bp)
protein (154aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
Nucleoside diphosphate kinase n=3 Tax=Bacteroides RepID=E2NH23_9BACE
nucleoside diphosphate kinase
rifcsphigho2_02_scaffold_12879_10
Parcubacteria bacterium GW2011_GWB1_43_6, Parcubacteria, Bacteria

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8493..8933
-----------------
DNA (441bp)
protein (147aa)
Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUP3_9RHOB id=120463 bin=ACD76 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT16257.1}; TaxID=1618872 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_6.;"
hypothetical protein
rifcsphigho2_02_scaffold_12879_11

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9082..9729
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00036A73A8
Marine sediment metagenome DNA, contig: S06H3_C04975 {ECO:0000313|EMBL:GAI09592.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
HAD family hydrolase
rifcsphigho2_02_scaffold_12879_12
unknown

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comp(9738..10283)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12879_13
unknown

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comp(10468..10752)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

Displaying 13 items

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