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rifcsphigho2_02_scaffold_12964

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12964_1
unknown

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comp(66..338)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12964_2
unknown

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comp(326..628)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12964_3
unknown

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729..1523
-----------------
DNA (795bp)
protein (265aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12964_4

Not on your lists

comp(1765..2553)
-----------------
DNA (789bp)
protein (263aa)
3' exoribonuclease; K12589 exosome complex component RRP42 id=5044447 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
exosome complex RNA-binding protein Rrp42
rifcsphigho2_02_scaffold_12964_5

Not on your lists

comp(2540..3238)
-----------------
DNA (699bp)
protein (233aa)
Probable exosome complex exonuclease 1 id=4918923 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Exosome complex component RRP41 {ECO:0000313|EMBL:KHO48382.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
exosome complex exonuclease Rrp41
rifcsphigho2_02_scaffold_12964_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3299..4063)
-----------------
DNA (765bp)
protein (255aa)
Probable exosome complex RNA-binding protein 1 id=4918922 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=AR5
exosome complex RNA-binding protein Rrp4
rifcsphigho2_02_scaffold_12964_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(4165..4878)
-----------------
DNA (714bp)
protein (238aa)
ribosome maturation protein SBDS; K14574 ribosome maturation protein SDO1 id=18248377 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribosome maturation protein SBDS; K14574 ribosome maturation protein SDO1 Tax=AR5
putative RNA-associated protein
rifcsphigho2_02_scaffold_12964_8
unknown

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5103..6227
-----------------
DNA (1125bp)
protein (375aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12964_9
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(6518..6814)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0MC73_9EURY
Uncharacterized protein Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_12964_10
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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6917..8158
-----------------
DNA (1242bp)
protein (414aa)
AAA ATPase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L422_KORCO
AAA ATPase Tax=RBG_16_Elusimicrobia_66_12_curated
AAA ATPase
rifcsphigho2_02_scaffold_12964_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8255..9055)
-----------------
DNA (801bp)
protein (267aa)
Proteasome endopeptidase complex (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5044433 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Proteasome endopeptidase complex (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=AR5
Proteasome endopeptidase complex (EC:3.4.25.1)
rifcsphigho2_02_scaffold_12964_12

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comp(9045..9506)
-----------------
DNA (462bp)
protein (154aa)
transmembrane_regions id=18248150 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48153.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_02_scaffold_12964_13
unknown

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comp(10636..10785)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

Displaying 13 items

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