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rifcsphigho2_02_scaffold_8958

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8958_1
unknown

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257..397
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8958_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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635..2041
-----------------
DNA (1407bp)
protein (469aa)
hypothetical protein n=1 Tax=Brachyspira innocens RepID=UPI00036C19DB
DNA methylase N-4/N-6 domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA methylase N-4/N-6 domain-containing protein
rifcsphigho2_02_scaffold_8958_3
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2055..2753
-----------------
DNA (699bp)
protein (233aa)
type II restriction enzyme MjaVIP (EC:3.1.21.4) Tax=CG_Desulfob_01
type II restriction enzyme MjaVIP (EC:3.1.21.4)
Putative type II restriction enzyme MjaVIP n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK13_THEYD
rifcsphigho2_02_scaffold_8958_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2734..3423
-----------------
DNA (690bp)
protein (230aa)
DNA methylase domain protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK12_THEYD rbh
DNA methylase domain protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA methylase domain-containing protein
rifcsphigho2_02_scaffold_8958_5

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comp(3433..5883)
-----------------
DNA (2451bp)
protein (817aa)
SMC domain-containing protein; K03529 chromosome segregation protein id=18247997 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Chromosome segregation protein {ECO:0000313|EMBL:KHO48000.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
SMC domain-containing protein
rifcsphigho2_02_scaffold_8958_6
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6385..7146)
-----------------
DNA (762bp)
protein (254aa)
Putative transcriptional regulator, TrmB n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8W0_METCZ
transcriptional regulator, TrmB
Putative transcriptional regulator, TrmB {ECO:0000313|EMBL:AFD00431.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Metha
rifcsphigho2_02_scaffold_8958_7
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7230..7874
-----------------
DNA (645bp)
protein (215aa)
Mn2+dependent serine/threonine protein kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAY6_METEZ
Mn2+dependent serine/threonine protein kinase
Mn2+dependent serine/threonine protein kinase {ECO:0000313|EMBL:ADI74503.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" so
rifcsphigho2_02_scaffold_8958_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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7932..8384
-----------------
DNA (453bp)
protein (151aa)
30S ribosomal protein S15/S13e id=4922344 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RBG_16_Micrarchaeota_49_10_curated
30S ribosomal protein S15
rifcsphigho2_02_scaffold_8958_9

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8593..9228
-----------------
DNA (636bp)
protein (212aa)
30S ribosomal protein S3Ae id=3060186 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1579367 species="Archaea.;" source="archaeon
ribosomal protein S3AE
rifcsphigho2_02_scaffold_8958_10
unknown

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9242..9427
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8958_11
AR5, Aenigmarchaeota, DPANN, Archaea

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9443..10069
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein; K09181 hypothetical protein id=5050406 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein; K09181 hypothetical protein Tax=AR5
Acyl-CoA synthetase (NDP forming), beta subunit
rifcsphigho2_02_scaffold_8958_12
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10283..11122)
-----------------
DNA (840bp)
protein (280aa)
Pyruvate synthase subunit PorA {ECO:0000313|EMBL:KFB76036.1}; EC=1.2.7.1 {ECO:0000313|EMBL:KFB76036.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.
porA1; pyruvate synthase, subunit A (EC:1.2.7.1)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRX5_ACCPU
rifcsphigho2_02_scaffold_8958_13
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(11226..11435)
-----------------
DNA (210bp)
protein (70aa)
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7) id=18248553 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7) Tax=AR5
porD; pyuvate ferredoxin oxidoreductase subunit delta (EC:1.2.7.1)
rifcsphigho2_02_scaffold_8958_14
unknown

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comp(11472..11957)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8958_15
AR19, Pacearchaeaota, DPANN, Archaea

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12140..12577
-----------------
DNA (438bp)
protein (146aa)
Tax=AR19
rifcsphigho2_02_scaffold_8958_16

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12574..13197
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B743C
Marine sediment metagenome DNA, contig: S01H1_S30401 {ECO:0000313|EMBL:GAG29946.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 16 items

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