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rifcsphigho2_02_scaffold_16037

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16037_trna_1
unknown

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comp(306..375)
-----------------
DNA (70bp)
transferRNA
rifcsphigho2_02_scaffold_16037_1
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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430..1029
-----------------
DNA (600bp)
protein (200aa)
RNA polymerase sigma-29 subunit SigE n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E2D4_9MICO
RNA polymerase sigma-29 subunit SigE {ECO:0000313|EMBL:EKA62799.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;
ECF subfamily RNA polymerase sigma-24 subunit
rifcsphigho2_02_scaffold_16037_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1106..1510
-----------------
DNA (405bp)
protein (135aa)
30S ribosomal protein S6e id=4010277 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
RPS6A; 30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=CG_Aenigma_01
30S ribosomal protein S6e
rifcsphigho2_02_scaffold_16037_3
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1594..1983
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4H8_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36715.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsphigho2_02_scaffold_16037_4
GWC2_OD1_53_7, Uhrbacteria, Parcubacteria, Bacteria

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2769..3998
-----------------
DNA (1230bp)
protein (410aa)
Translation initiation factor 2, gamma subunit, eIF-2gamma; GTPase id=4010279 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Translation initiation factor 2 subunit gamma {ECO:0000313|EMBL:KKW34782.1}; TaxID=1618986 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_53_7.;"
translation initiation factor IF-2
rifcsphigho2_02_scaffold_16037_5
unknown

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4101..5282
-----------------
DNA (1182bp)
protein (394aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16037_6
unknown

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5287..5424
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16037_7
unknown

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5412..5864
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16037_8
unknown

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comp(5886..6158)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16037_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(6148..7920)
-----------------
DNA (1773bp)
protein (591aa)
Probable translation initiation factor IF-2 id=4010259 bin=PER_GWC2_41_7 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=RBG_16_Micrarchaeota_36_9_curated
InfB_2; translation initiation factor IF-2
rifcsphigho2_02_scaffold_16037_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(7976..9415)
-----------------
DNA (1440bp)
protein (480aa)
Peptidase, M48B family protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IWQ4_9CHRO
M48B family peptidase Tax=RBG_16_Micrarchaeota_36_9_curated
Zn-dependent protease with chaperone function
Displaying 11 items

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