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rifcsphigho2_02_scaffold_16599

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16599_1
AR5, Aenigmarchaeota, DPANN, Archaea

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576..1019
-----------------
DNA (444bp)
protein (148aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5040439 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=AR5
transcription antitermination protein NusG
rifcsphigho2_02_scaffold_16599_2
unknown

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1147..1443
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16599_3
AR5, Aenigmarchaeota, DPANN, Archaea

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1483..2385
-----------------
DNA (903bp)
protein (301aa)
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 id=5043015 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 Tax=AR5
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsphigho2_02_scaffold_16599_4
AR17, Woesearchaeaota, DPANN, Archaea

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comp(2510..2770)
-----------------
DNA (261bp)
protein (87aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LVN9_9EURY
RelE protein; K06218 RelE protein Tax=AR17
RelE protein
rifcsphigho2_02_scaffold_16599_5
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2767..2985)
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72914.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
rifcsphigho2_02_scaffold_16599_6

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comp(3032..6511)
-----------------
DNA (3480bp)
protein (1160aa)
SNF2-related protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQP5_9BACT
Putative SNF2-related protein {ECO:0000313|EMBL:CEG11246.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
non-specific serine/threonine protein kinase
rifcsphigho2_02_scaffold_16599_7

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6591..7067
-----------------
DNA (477bp)
protein (159aa)
50S ribosomal protein L11P id=4367357 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
ribosomal protein L11
rifcsphigho2_02_scaffold_16599_8

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7171..7695
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS53557.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
transmembrane_regions id=18248142 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_16599_9
AR5, Aenigmarchaeota, DPANN, Archaea

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8106..8393
-----------------
DNA (288bp)
protein (96aa)
alias=gwa2_scaffold_63_8 id=18248718 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_63_8 Tax=AR5
rifcsphigho2_02_scaffold_16599_10
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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8408..9103
-----------------
DNA (696bp)
protein (232aa)
id=4120973 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4120973 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_16599_11
CG_Pacearch_04, Pacearchaeota, Archaea

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9206..9709
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771F93
hypothetical protein Tax=CG_Pacearch_04
MarR family transcriptional regulator
rifcsphigho2_02_scaffold_16599_12

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comp(9744..10175)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB8F
Uncharacterized protein {ECO:0000313|EMBL:KKO02767.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_16599_13
unknown

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10270..10539
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16599_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10575..13145)
-----------------
DNA (2571bp)
protein (857aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Leucine-tRNA ligase
rifcsphigho2_02_scaffold_16599_15
unknown

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comp(13210..13692)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16599_16

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14293..15045
-----------------
DNA (753bp)
protein (251aa)
Cell division ATPase MinD, archaeal id=4930118 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
chromosome partitioning ATPase
rifcsphigho2_02_scaffold_16599_17
unknown

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15103..16350
-----------------
DNA (1248bp)
protein (416aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16599_18
unknown

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16390..16890
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16599_19

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comp(17032..17793)
-----------------
DNA (762bp)
protein (254aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T1CHU6_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EQD77166.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 19 items

View Taxonomy