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rifcsphigho2_02_scaffold_16718

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16718_1
unknown

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comp(2..403)
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16718_2

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comp(488..1819)
-----------------
DNA (1332bp)
protein (444aa)
Transposase n=1 Tax=uncultured archaeon GZfos26F9 RepID=Q64BW4_9ARCH
IS66 family element, transposase
Transposase {ECO:0000313|EMBL:AAU83113.1}; TaxID=285387 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26F9.;"
rifcsphigho2_02_scaffold_16718_3
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(2086..3282)
-----------------
DNA (1197bp)
protein (399aa)
Digeranylgeranylglycerophospholipid reductase {ECO:0000256|HAMAP-Rule:MF_01287}; Short=DGGGPL reductase {ECO:0000256|HAMAP-Rule:MF_01287};; EC=1.3.99.34 {ECO:0000256|HAMAP-Rule:MF_01287};; 2,3-bis-O-g
Digeranylgeranylglycerophospholipid reductase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RC94_9EURY
43 kDa subunit bacteriochlorophyll synthase-like protein
rifcsphigho2_02_scaffold_16718_4
unknown

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comp(3730..3849)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16718_5
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(3846..4211)
-----------------
DNA (366bp)
protein (122aa)
DNA polymerase beta domain protein region n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YUI8_9THEM
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEH51459.1}; TaxID=688269 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga therma
rifcsphigho2_02_scaffold_16718_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4272..5081)
-----------------
DNA (810bp)
protein (270aa)
UbiA family prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=5042153 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
UbiA family prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=AR5
prenyltransferase UbiA
rifcsphigho2_02_scaffold_16718_7
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5163..6461
-----------------
DNA (1299bp)
protein (433aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMW2_THEBM
seryl-tRNA synthetase
rifcsphigho2_02_scaffold_16718_8
unknown

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comp(6458..6691)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16718_9
unknown

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comp(6744..6872)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16718_10

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6986..9172
-----------------
DNA (2187bp)
protein (729aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=5047674 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA topoisomerase I
Displaying 10 items

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