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rifcsphigho2_02_scaffold_14852

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_14852_1

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comp(112..276)
-----------------
DNA (165bp)
protein (55aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5042075 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA-directed RNA polymerase subunit K
rifcsphigho2_02_scaffold_14852_2
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(307..804)
-----------------
DNA (498bp)
protein (166aa)
ArsR family transcriptional regulator id=18248021 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ArsR family transcriptional regulator Tax=AR5
regulatory protein ArsR
rifcsphigho2_02_scaffold_14852_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(892..1425)
-----------------
DNA (534bp)
protein (178aa)
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e id=18248019 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=AR5
50S ribosomal protein L10
rifcsphigho2_02_scaffold_14852_4

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1571..2470
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FSN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU53450.1}; TaxID=1618714 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_47_10.;"
hypothetical protein
rifcsphigho2_02_scaffold_14852_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

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2532..3203
-----------------
DNA (672bp)
protein (224aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Uncharacterized protein id=5800565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
uridylate kinase
rifcsphigho2_02_scaffold_14852_6

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3295..4509
-----------------
DNA (1215bp)
protein (405aa)
Putative uncharacterized protein id=4922343 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48008.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_02_scaffold_14852_7
CG_CPR03_02, CG_CPR03, Bacteria

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4484..4780
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FB15_9BACT
hypothetical protein Tax=CG_CPR03_02
rifcsphigho2_02_scaffold_14852_8
AR5, Aenigmarchaeota, DPANN, Archaea

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4841..5350
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein (Fragment) id=18248006 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein (Fragment) Tax=AR5
rifcsphigho2_02_scaffold_14852_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5493..5648
-----------------
DNA (156bp)
protein (52aa)
50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e Tax=RBG_16_Micrarchaeota_36_9_curated
50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=18248008 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl44e; 50S ribosomal protein L44
rifcsphigho2_02_scaffold_14852_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5786..6409
-----------------
DNA (624bp)
protein (208aa)
Putative membrane protein id=4922339 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative membrane protein Tax=AR5
rifcsphigho2_02_scaffold_14852_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

6406..7323
-----------------
DNA (918bp)
protein (306aa)
rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=18248010 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=AR5
rRNA pseudouridine synthase
rifcsphigho2_02_scaffold_14852_12
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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8266..10041
-----------------
DNA (1776bp)
protein (592aa)
Predicted ATPase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PUI3_METTM
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 Tax=CG_Aenigma_01
ATPase
rifcsphigho2_02_scaffold_14852_13
unknown

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comp(10108..10434)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14852_14
unknown

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10508..11005
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14852_15
unknown

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10977..11102
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14852_16
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(11164..11496)
-----------------
DNA (333bp)
protein (111aa)
nac; nascent polypeptide-associated complex protein id=18248654 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
nac; nascent polypeptide-associated complex protein Tax=AR5
nac; nascent polypeptide-associated complex protein
rifcsphigho2_02_scaffold_14852_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11574..12737
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein; K08971 putative membrane protein id=5043053 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein; K08971 putative membrane protein Tax=AR5
hypothetical protein
rifcsphigho2_02_scaffold_14852_18
unknown

Not on your lists

12970..13155
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14852_19
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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13254..14687
-----------------
DNA (1434bp)
protein (478aa)
Cell surface protein n=1 Tax=uncultured archaeon GZfos26D8 RepID=Q5XQ52_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
peptidase S8 and S53 subtilisin kexin sedolisin
rifcsphigho2_02_scaffold_14852_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14730..14948
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein id=4930110 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein Tax=AR5
rifcsphigho2_02_scaffold_14852_21
unknown

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15113..15439
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14852_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(15661..17613)
-----------------
DNA (1953bp)
protein (651aa)
Putative uncharacterized protein id=18248077 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Putative uncharacterized protein Tax=AR5
Displaying 22 items

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