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rifcsphigho2_02_scaffold_9418

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9418_1
Drosophila melanogaster, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(1..11115)
-----------------
DNA (11115bp)
protein (3705aa)
PREDICTED: mucin-2-like n=1 Tax=Danio rerio RepID=UPI00038387FE
Mucin related 11Da {ECO:0000313|EMBL:AAN09644.3}; TaxID=7227 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha
hypothetical protein
rifcsphigho2_02_scaffold_9418_2
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(11123..11734)
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037322E7
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_02_scaffold_9418_3
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(12160..12588)
-----------------
DNA (429bp)
protein (143aa)
alias=gwa2_scaffold_5599_4 id=18248557 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_5599_4 Tax=AR5
rifcsphigho2_02_scaffold_9418_4
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(12744..13292)
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein; K07572 putative nucleotide binding protein id=18248219 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR5
DNA-binding protein
rifcsphigho2_02_scaffold_9418_5
unknown

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comp(13237..13434)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9418_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(13449..13775)
-----------------
DNA (327bp)
protein (109aa)
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=18248222 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=AR5
hypothetical protein
rifcsphigho2_02_scaffold_9418_7

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comp(13912..14190)
-----------------
DNA (279bp)
protein (93aa)
50S ribosomal protein L21e id=18248221 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Ribosomal protein L21E
rifcsphigho2_02_scaffold_9418_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(14555..15730)
-----------------
DNA (1176bp)
protein (392aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036841E5
ATPase AAA; K07133 Tax=RBG_13_Pacearchaeota_36_9_curated
ATPase AAA
rifcsphigho2_02_scaffold_9418_9
unknown

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comp(15828..17747)
-----------------
DNA (1920bp)
protein (640aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9418_10
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(17780..18964)
-----------------
DNA (1185bp)
protein (395aa)
Conserved protein id=4379349 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peptidase m50 Tax=AR5
peptidase m50
rifcsphigho2_02_scaffold_9418_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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19309..20781
-----------------
DNA (1473bp)
protein (491aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=SYK_CARHZ
rifcsphigho2_02_scaffold_9418_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(20895..22241)
-----------------
DNA (1347bp)
protein (449aa)
Putative uncharacterized protein C3_0010 n=1 Tax=uncultured archaeon RepID=Q2Y4G1_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
DEXX-box atpase
rifcsphigho2_02_scaffold_9418_13

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comp(22290..23483)
-----------------
DNA (1194bp)
protein (398aa)
Transposase n=1 Tax=uncultured archaeon GZfos26F9 RepID=Q64BW1_9ARCH
Transposase {ECO:0000313|EMBL:AAU83116.1}; TaxID=285387 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26F9.;"
transposase
Displaying 13 items

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