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rifcsphigho2_02_scaffold_2697

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2697_1
unknown

Not on your lists

comp(125..235)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(641..871)
-----------------
DNA (231bp)
protein (77aa)
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein id=18248263 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein Tax=AR5
like-Sm ribonucleoprotein, core
rifcsphigho2_02_scaffold_2697_3
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

983..1351
-----------------
DNA (369bp)
protein (123aa)
30S ribosomal protein S8e n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWQ7_FERPA
ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;
rifcsphigho2_02_scaffold_2697_4
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

1510..2895
-----------------
DNA (1386bp)
protein (462aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DQB4_9BACT
LamG domain protein jellyroll fold domain protein Tax=GWA2_OD1_45_21
rifcsphigho2_02_scaffold_2697_5

Not on your lists

3037..3942
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
Marine sediment metagenome DNA, contig: S06H3_S00013 {ECO:0000313|EMBL:GAI32157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Filamentation induced by cAMP protein Fic
rifcsphigho2_02_scaffold_2697_6
unknown

Not on your lists

comp(4227..4646)
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_7
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(4657..15237)
-----------------
DNA (10581bp)
protein (3527aa)
WD40-domain containing protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5G0_THEGJ
metallophosphoesterase domain-containing protein Tax=CG_Elusi_03
WD40-domain containing protein
rifcsphigho2_02_scaffold_2697_8
unknown

Not on your lists

comp(15251..16678)
-----------------
DNA (1428bp)
protein (476aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_9
unknown

Not on your lists

comp(16662..17228)
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_10
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(17311..19263)
-----------------
DNA (1953bp)
protein (651aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C4U7_THENR
methionyl-tRNA synthetase
rifcsphigho2_02_scaffold_2697_11

Not on your lists

19294..20445
-----------------
DNA (1152bp)
protein (384aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KHO51553.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KHO51553.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
tryptophanyl-tRNA synthetase n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00035F80F6
tryptophanyl-tRNA synthetase
rifcsphigho2_02_scaffold_2697_12
unknown

Not on your lists

20464..20634
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_13
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20862..21779)
-----------------
DNA (918bp)
protein (306aa)
TPR repeat-containing protein n=1 Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5U9S9_BRAM5
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADG71452.1}; TaxID=526224 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51
rifcsphigho2_02_scaffold_2697_14
unknown

Not on your lists

21923..22114
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_15
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22257..22925)
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
thermostable 8-oxoguanine DNA glycosylase id=18248969 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_02_scaffold_2697_16
unknown

Not on your lists

23113..23253
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_17
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(23257..24003)
-----------------
DNA (747bp)
protein (249aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Putative uncharacterized protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S8Q7_METSF
hypothetical protein
rifcsphigho2_02_scaffold_2697_18
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(24032..24262)
-----------------
DNA (231bp)
protein (77aa)
Putative uncharacterized protein n=1 Tax=Thermococcus sp. AM4 RepID=B7R331_9EURY
putative periplasmic or secreted lipoprotein
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:AIG98377.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Arc
rifcsphigho2_02_scaffold_2697_19
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24259..24528)
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6B83C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE18441.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K
rifcsphigho2_02_scaffold_2697_20
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(24519..25298)
-----------------
DNA (780bp)
protein (260aa)
ORC complex protein Cdc6/Orc1 Tax=RBG_16_Micrarchaeota_36_9_curated
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
rifcsphigho2_02_scaffold_2697_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(25350..25676)
-----------------
DNA (327bp)
protein (109aa)
Nucleotidyltransferase n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E87_9ARCH
hypothetical protein; K07076 Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_02_scaffold_2697_22

Not on your lists

comp(25646..26011)
-----------------
DNA (366bp)
protein (122aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E88_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82289.1}; TaxID=285397 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos13E1.;"
HEPN domain-containing protein
rifcsphigho2_02_scaffold_2697_23
unknown

Not on your lists

26125..26391
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2697_24
Anoxybacillus sp. BCO1, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26404..27234
-----------------
DNA (831bp)
protein (277aa)
RNA polymerase sigma54 factor n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002EE734D
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:KHF30036.1}; TaxID=1548750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. BCO1.;"
really partial sequence, bad hit values in NCBI_not validated Cindy Castelle (5/11/17)
rifcsphigho2_02_scaffold_2697_25
Rozella allomycis, Rozella, Cryptomycota, Fungi

Not on your lists

27298..28530
-----------------
DNA (1233bp)
protein (411aa)
Enolase {ECO:0000313|EMBL:EPZ33681.1}; EC=4.2.1.11 {ECO:0000313|EMBL:EPZ33681.1};; TaxID=988480 species="Eukaryota; Fungi; Cryptomycota; Rozella.;" source="Rozella allomycis CSF55.;"
enolase (EC:4.2.1.11)
Eno1 protein n=1 Tax=Xenopus tropicalis RepID=B0BMH7_XENTR
rifcsphigho2_02_scaffold_2697_26

Not on your lists

comp(28658..29926)
-----------------
DNA (1269bp)
protein (423aa)
Marine sediment metagenome DNA, contig: S01H4_C00124 {ECO:0000313|EMBL:GAG65148.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
proteinase inhibitor i4 serpin; K13963 serpin B id=5047349 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
proteinase inhibitor I4 serpin
rifcsphigho2_02_scaffold_2697_27
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30114..31706)
-----------------
DNA (1593bp)
protein (531aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=RBG_13_Deltaproteobacteria_61_14_curated
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase n=1 Tax=planctomycete KSU-1 RepID=I3IQN2_9PLAN
rifcsphigho2_02_scaffold_2697_28
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31799..32896
-----------------
DNA (1098bp)
protein (366aa)
aspB; Aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:CDM68846.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM68846.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGY2_9CLOT
rifcsphigho2_02_scaffold_2697_29
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

32973..33332
-----------------
DNA (360bp)
protein (120aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
rifcsphigho2_02_scaffold_2697_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(33408..35411)
-----------------
DNA (2004bp)
protein (668aa)
SMC domain protein id=4352999 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DNA double-strand repair ATPase Rad50; K03546 exonuclease SbcC Tax=AR5
SMC protein
Displaying items 1-30 of 43 in total

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