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rifcsphigho2_02_scaffold_2988

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2988_1
unknown

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82..312
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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856..1260
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E575F
id=5049670 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_2988_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1263..1871
-----------------
DNA (609bp)
protein (203aa)
Protein containing Nucleotidyltransferase domain n=1 Tax=sediment metagenome RepID=D9PJD4_9ZZZZ
hypothetical protein Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_2988_4
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2020..2889)
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized protein id=5042140 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein Tax=AR5
rifcsphigho2_02_scaffold_2988_5
AR5, Aenigmarchaeota, DPANN, Archaea

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3004..4146
-----------------
DNA (1143bp)
protein (381aa)
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=5042139 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=AR5
Glucosamine-1-phosphate N-acetyltransferase
rifcsphigho2_02_scaffold_2988_6
AR5, Aenigmarchaeota, DPANN, Archaea

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4257..5972
-----------------
DNA (1716bp)
protein (572aa)
glucosamine/fructose-6-phosphate aminotransferase, isomerizing; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=18248088 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
glucosamine/fructose-6-phosphate aminotransferase, isomerizing; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=AR5
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
rifcsphigho2_02_scaffold_2988_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(6098..7777)
-----------------
DNA (1680bp)
protein (560aa)
ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=AR5
DNA ligase id=3060188 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_2988_8

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7833..9542
-----------------
DNA (1710bp)
protein (570aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227};
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=18248491 bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
CTP synthase (EC:6.3.4.2)
rifcsphigho2_02_scaffold_2988_9
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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9613..10071
-----------------
DNA (459bp)
protein (153aa)
nitroreductase family protein (EC:1.-.-.-)
Predicted nitroreductase family protein {ECO:0000313|EMBL:CAJ35388.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAJ35388.1};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methan
Predicted nitroreductase family protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8A5_UNCMA
rifcsphigho2_02_scaffold_2988_10
unknown

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10114..10878
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_11
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10875..12320
-----------------
DNA (1446bp)
protein (482aa)
Putative Glycosyl transferase family 39 n=1 Tax=Microcystis aeruginosa PCC 9809 RepID=I4HZV4_MICAE
Putative Glycosyl transferase family 39 {ECO:0000313|EMBL:CCI27578.1}; TaxID=1160285 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aerugino
rifcsphigho2_02_scaffold_2988_12
unknown

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comp(12298..12525)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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12621..13877
-----------------
DNA (1257bp)
protein (419aa)
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein id=42391 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
rifcsphigho2_02_scaffold_2988_14
unknown

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comp(13962..14348)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_15
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(14466..14852)
-----------------
DNA (387bp)
protein (129aa)
alias=gwa2_scaffold_192_83 id=18248071 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_192_83 Tax=AR5
rifcsphigho2_02_scaffold_2988_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(15016..15513)
-----------------
DNA (498bp)
protein (166aa)
id=3296227 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
alias=gwa2_scaffold_192_84 Tax=AR5
rifcsphigho2_02_scaffold_2988_17
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(15635..16171)
-----------------
DNA (537bp)
protein (179aa)
id=3296229 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
alias=gwa2_scaffold_192_86 Tax=AR5
rifcsphigho2_02_scaffold_2988_18
unknown

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16223..16567
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_19
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(16705..17646)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein Tax=RBG_13_Euryarchaeota_31_8_curated
huntingtin interacting protein E-like protein id=5043674 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_2988_trna_1
unknown

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comp(17735..17802)
-----------------
DNA (68bp)
transferRNA
rifcsphigho2_02_scaffold_2988_20
AR5, Aenigmarchaeota, DPANN, Archaea

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17995..18174
-----------------
DNA (180bp)
protein (60aa)
Putative uncharacterized protein id=4922334 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
UPF0434 protein ycaR; K09791 hypothetical protein Tax=AR5
ycaR
rifcsphigho2_02_scaffold_2988_21
unknown

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18281..18463
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_22

Not on your lists

18511..20091
-----------------
DNA (1581bp)
protein (527aa)
id=3296232 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Seg {ECO:0000313|EMBL:KHO48079.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_02_scaffold_2988_23
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(20088..20369)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:AET65556.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
RelE/StbE family addiction module toxin
rifcsphigho2_02_scaffold_2988_24

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comp(20356..20541)
-----------------
DNA (186bp)
protein (62aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NHB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKA48768.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_02_scaffold_2988_25
unknown

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comp(20607..20897)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_26

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comp(21044..24400)
-----------------
DNA (3357bp)
protein (1119aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55275.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_02_scaffold_2988_27
unknown

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comp(24378..25124)
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2988_28

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comp(25180..35286)
-----------------
DNA (10107bp)
protein (3369aa)
Filamentous hemagglutinin family N-terminal domain protein n=1 Tax=Escherichia coli P0305260.3 RepID=N4EZ29_ECOLX
Marine sediment metagenome DNA, contig: S01H1_S25083 {ECO:0000313|EMBL:GAG23762.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_2988_29
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(35316..39314)
-----------------
DNA (3999bp)
protein (1333aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DQB4_9BACT
thrombospondin N-terminal-like domain-containing protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
autotransporter-associated beta strand repeat-containing protein
Displaying 30 items

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