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rifcsphigho2_02_scaffold_3994_17

Organism: RIFCSPHIGHO2_02_FULL_Aenigmarchaeota_36_49

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38
Location: 14321..15493

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DEAD-box protein A {ECO:0000313|EMBL:AKB84226.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanoc similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 389.0
  • Bit_score: 450
  • Evalue 1.90e-123
DEAD/DEAH box helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 382.0
  • Bit_score: 446
  • Evalue 9.60e-123
Probable ATP-dependent RNA helicase id=5799626 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 391.0
  • Bit_score: 446
  • Evalue 2.60e-122

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Taxonomy

Methanococcoides methylutens → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1173
ATGAAAACATTTAAAGAACTTGGGCTGAGTAATGACTTAGTCAAAAACATACAGAAATTAGGATTTACAAAACCAACTCAAATACAGGAAATGTCAATTCCGCATATTATGAAAGGAACTGATGTAATAGGGCAATCATCAACAGGTTCAGGAAAAACACTGGCTTTTGGCTGTGGAATTATACACCAGGTAATTCATGAACGAGGAATTCAGGCAATTGTACTTACTCCTACAAGAGAACTTGCAGAACAGGTTAGGAATGATCTTGATGAACTTTCAAATAAAAAAATAAGGATTACTGCTATATACGGAGGAGTTTCTATTGAACCTCAGATCAATGAGCTTCATAGAACAGATGTAGTAGTAGCTACTCCAGGCAGATTATTGGATCATCTTGAAAGAAGAACGATCAATATGTCAAAAGTCAAATTTCTGGTTCTAGATGAAGCAGATCGCATGCTGGATATGGGTTTTATAGATGATGTGGAAAAAATAATTAAAACATGTCCTGAAAAACGCCAGACATTGTTCTTTTCTGCTACAATTTCGTCTTCTATCAAAAGGCTGGCAGATAGATATATGAACAAACCAGTTAGTGTCTCAGCTGAAAAAATGGTTGATCCGAGAAAACTCAAGCAGGTTTATTATGATGTCCAGAAAAATATGAAATTTTCTCTGCTTGTTCATTTGCTAAAGCATGAAAAAAGTGAATTAATAATGGTTTTCTGCAACACTAGGGAAAACACTGATTTTGTTGCTAAAAATCTCAAGATAAATGGAATCAATGCAATTCCTATTCATGGCGGCTTAGCACAAAACAGCCGCACTAAAACTATTGGATTATTTGACGAAGGAAAGGCAGGAGTATTAGTATGCACTGATGTAGCAGCTCGCGGCCTGCATATTGAAAATATTTCACATGTTTACAATTATGATATTCCAAGAGAATCTAAAAATTATGTTCACAGGATAGGCAGAACAGCCAGAGCAGGAGAACAGGGGAAAGTAATTAATCTGCTATGTGACTATGAACATGATAATTTTTCCAGGATTTTGAAGGATTATCGTGAATTTTCAATCAAAAAGATTGAAAAGCCCTATATAGAAAGAGTAAATATTATTAGCACTGGTGCACGCAGACATAATTCACACATTCGCAGAAGAAGATATTGA
PROTEIN sequence
Length: 391
MKTFKELGLSNDLVKNIQKLGFTKPTQIQEMSIPHIMKGTDVIGQSSTGSGKTLAFGCGIIHQVIHERGIQAIVLTPTRELAEQVRNDLDELSNKKIRITAIYGGVSIEPQINELHRTDVVVATPGRLLDHLERRTINMSKVKFLVLDEADRMLDMGFIDDVEKIIKTCPEKRQTLFFSATISSSIKRLADRYMNKPVSVSAEKMVDPRKLKQVYYDVQKNMKFSLLVHLLKHEKSELIMVFCNTRENTDFVAKNLKINGINAIPIHGGLAQNSRTKTIGLFDEGKAGVLVCTDVAARGLHIENISHVYNYDIPRESKNYVHRIGRTARAGEQGKVINLLCDYEHDNFSRILKDYREFSIKKIEKPYIERVNIISTGARRHNSHIRRRRY*