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rifcsphigho2_02_scaffold_8292_17

Organism: RIFCSPHIGHO2_02_FULL_Aenigmarchaeota_36_49

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38
Location: comp(13310..14401)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 195.0
  • Bit_score: 80
  • Evalue 4.90e-12
DNA-directed RNA polymerase subunit alpha n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF69_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 195.0
  • Bit_score: 80
  • Evalue 3.50e-12
rpoA; DNA-directed RNA polymerase alpha subunit similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 301.0
  • Bit_score: 79
  • Evalue 1.70e-12

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Taxonomy

Acetonema longum → Acetonema → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGATTATGCTACGAAATAAAACTACGCCTGAACAGAGAAAATTCATTGCTCGTGCATACAGCTGCGGGGTTCCCCGAAAATATTTTATGGAAACATTTGGCGTTGGAGAAGATGCTGTAAAACAATATCTTCGTAGTTATGGAGATAATCCGGGTTTTGAAGCAGAACGGGTCAGCAGAGGGCTGAGGACTTATAAAGAACTTCCTGATGATTTCATACATCCTGATTACAAGTTGAAGGAACTTATCTGGGCTAAAGTGATAATTCCATTAACAGATCAAACTATGCTGAGTTTGGGAAGTGGTGATGTTGCTGAAAGTTTAACTCCTTATGAGAGATTTATCATAGAACTCTATGGAATGTCGGATCCAAGAAATTTTGAATCAACTCTCTGGGAAGAACTTAATACCTACTTATTGGAACATACTGAAGAATCGTTGGATGAGGTCTTGGGGCAAATGAAACAGCGTGCACTAACCCGTGTCAGAGAATATCCCGGGTTTATGATACTGGATGAAACAGGTATTGACAAAGCAATTGAACAGGTTCTGAATAAAAGAGATGCTGGTATTATTCATGCTTATTTTATAGATGGCATGACTATGAAACAAATTGGTGAAACACCTGAAATTGCGCAAAATCAGGAAACAGGCGGAATAATATCAAGAAGTAATCTAAGTATTCGTATTCGTAAAGGAATGAAGAAACTCGAAGAATGCATTTCAAAAGTTGCACAATATATTGTATTCAAAGGAGATGGTGTGATTAAAAGAGATGATCTCTACAAAGCTCTCCGTGAAATGGAGCTGGGAATAACTCCAGAAGAAATTTTAGATGCAGGACAGTATGAGCAGTTCAGAGAAGCCTATCCTGTTGGAGGAGACAAACCTATAATGGATGCTTCGATTGAAGAGCTTGGTTTACGGATTAAGGCATACAACTGCCTTAAAAAAAAGGATATAAACACAATTGGCGAACTGACTGATAAGCTTGAAATAGAATTAAAAAACATAAGAGGATTTGGTAGAAAATCTCTTTATGATGTAAAGGAAAGACTCGGAGAACACGGGCTTTCATTGAGGGAGAAATAA
PROTEIN sequence
Length: 364
MIMLRNKTTPEQRKFIARAYSCGVPRKYFMETFGVGEDAVKQYLRSYGDNPGFEAERVSRGLRTYKELPDDFIHPDYKLKELIWAKVIIPLTDQTMLSLGSGDVAESLTPYERFIIELYGMSDPRNFESTLWEELNTYLLEHTEESLDEVLGQMKQRALTRVREYPGFMILDETGIDKAIEQVLNKRDAGIIHAYFIDGMTMKQIGETPEIAQNQETGGIISRSNLSIRIRKGMKKLEECISKVAQYIVFKGDGVIKRDDLYKALREMELGITPEEILDAGQYEQFREAYPVGGDKPIMDASIEELGLRIKAYNCLKKKDINTIGELTDKLEIELKNIRGFGRKSLYDVKERLGEHGLSLREK*