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rifcsphigho2_02_scaffold_6353

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6353_1
CG_Woesearch_01, Woesearchaeota, Archaea

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175..621
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFG8_9EURY id=5103467 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_6353_2
unknown

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1104..1364
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6353_3
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1480..5961)
DNA (4482bp) protein (1494aa)
UPI0003D1C70E related cluster n=1 Tax=unknown RepID=UPI0003D1C70E
Putative Ig domain-containing protein {ECO:0000313|EMBL:ETA68607.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Meth
Cadherin-like domain-containing protein
rifcsphigho2_02_scaffold_6353_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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6436..6804
DNA (369bp) protein (123aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5799963 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_6353_5
AR9, Woesearchaeaota, DPANN, Archaea

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6810..7196
DNA (387bp) protein (129aa)
Tax=AR9
rifcsphigho2_02_scaffold_6353_6
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(7399..9531)
DNA (2133bp) protein (711aa)
hypothetical protein Tax=CG_Pacearch_04
rifcsphigho2_02_scaffold_6353_7

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comp(9599..10888)
DNA (1290bp) protein (430aa)
hypothetical protein
PROKAR_LIPOPROTEIN id=5043761 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47077.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_6353_8
CG_Pacearch_04, Pacearchaeota, Archaea

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11053..12189
DNA (1137bp) protein (379aa)
geranylgeranyl reductase Tax=CG_Pacearch_04
geranylgeranyl reductase id=5045950 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase
rifcsphigho2_02_scaffold_6353_9

Not on your lists

12250..15579
DNA (3330bp) protein (1110aa)
oligosaccharyl transferase, STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=5045945 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Dolichyl-diphosphooligosaccharide-protein glycosyltransferase {ECO:0000313|EMBL:KHO46290.1}; EC=2.4.99.18 {ECO:0000313|EMBL:KHO46290.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.
Oligosaccharyl transferase STT3 subunit
rifcsphigho2_02_scaffold_6353_10
CG_Woesearch_02, Woesearchaeota, Archaea

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15611..16273
DNA (663bp) protein (221aa)
glycosyl transferase Tax=CG_Woesearch_02
family 2 glycosyl transferase id=5045944 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein 16
rifcsphigho2_02_scaffold_6353_11

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16281..16613
DNA (333bp) protein (111aa)
hypothetical protein; K09153 hypothetical protein id=5045943 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46288.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_6353_12
AR11, Woesearchaeaota, DPANN, Archaea

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16620..17765
DNA (1146bp) protein (382aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=AR11
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] id=5045942 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein
rifcsphigho2_02_scaffold_6353_13

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comp(17762..18511)
DNA (750bp) protein (250aa)
Nucleotidyl transferase id=5045940 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleotidyl transferase {ECO:0000313|EMBL:KHO46285.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis
rifcsphigho2_02_scaffold_6353_14
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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18628..18996
DNA (369bp) protein (123aa)
cupin id=5095302 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Cupin {ECO:0000313|EMBL:KKP36323.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
cupin
rifcsphigho2_02_scaffold_6353_15
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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18993..19904
DNA (912bp) protein (304aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] id=5095303 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
ADP-L-glycero-D-manno-heptose-6-epimerase, ADP-L-glycero-D-manno-heptose 6-epimerase {ECO:0000313|EMBL:KKP36324.1}; EC=5.1.3.20 {ECO:0000313|EMBL:KKP36324.1};; TaxID=1619065 species="Bacteria; Peregri
ADP-L-glycero-D-manno-heptose-6-epimerase
rifcsphigho2_02_scaffold_6353_16
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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19897..20874
DNA (978bp) protein (326aa)
rfaE bifunctional protein id=5095304 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
RfaE bifunctional protein {ECO:0000313|EMBL:KKP36325.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
rfaE bifunctional protein
rifcsphigho2_02_scaffold_6353_17
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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20867..21400
DNA (534bp) protein (178aa)
cell division; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] id=5095305 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Cell division, D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:KKP36326.1}; EC=3.1.3.82 {ECO:0000313|EMBL:KKP36326.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" s
cell division
rifcsphigho2_02_scaffold_6353_18
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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21424..21912
DNA (489bp) protein (163aa)
rfaE bifunctional protein id=5095306 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
RfaE bifunctional protein {ECO:0000313|EMBL:KKP36327.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
rfaE bifunctional protein
rifcsphigho2_02_scaffold_6353_19
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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21959..22654
DNA (696bp) protein (232aa)
family 2 glycosyl transferase id=5095307 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:KKP36328.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
Glycosyl transferase family 2
rifcsphigho2_02_scaffold_6353_20
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(22735..24126)
DNA (1392bp) protein (464aa)
radical SAM protein id=5095308 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Radical SAM protein {ECO:0000313|EMBL:KKP36329.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_6353_21

Not on your lists

24265..26094
DNA (1830bp) protein (610aa)
4-amino-4-deoxy-L-arabinose transferase n=1 Tax=uncultured bacterium RepID=K2FYA7_9BACT
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EKE15845.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_02_scaffold_6353_22
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(26154..26849)
DNA (696bp) protein (232aa)
dolichyl-phosphate mannose synthase related protein Tax=RBG_13_Nitrospirae_41_22_curated
dolichol-p-glucose synthetase id=7200469 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_6353_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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27087..27806
DNA (720bp) protein (240aa)
cell wall biosynthesis glycosyltransferase Tax=RBG_16_RIF_OP11_02_41_13_curated
wcaA; glycosyltransferases id=23560 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
glycosyl transferase family protein
rifcsphigho2_02_scaffold_6353_24

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27816..29270
DNA (1455bp) protein (485aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
uae; UDP-N-acetylglucosamine 2-epimerase id=5045933 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHO46278.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_6353_25

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29245..31500
DNA (2256bp) protein (752aa)
id=5045932 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46277.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_6353_26
AR11, Woesearchaeaota, DPANN, Archaea

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31504..33174
DNA (1671bp) protein (557aa)
id=5044235 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_02_scaffold_6353_27

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33155..33511
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46273.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
id=5045928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_6353_28

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comp(33550..34128)
DNA (579bp) protein (193aa)
Marine sediment metagenome DNA, contig: S01H1_S00678 {ECO:0000313|EMBL:GAF90627.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_6353_29
unknown

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comp(34398..34550)
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6353_30
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

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34586..34855
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKT71665.1}; TaxID=1618384 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
Displaying items 1-30 of 31 in total

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