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rifcsphigho2_02_scaffold_24071

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_24071_1

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3..398
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK48372.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_02_scaffold_24071_2
unknown

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comp(595..798)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24071_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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834..3488
DNA (2655bp) protein (885aa)
Surface layer protein B SlgB-2
Surface layer protein B (SlgB-2) Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5048115 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_24071_4
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3640..5109
DNA (1470bp) protein (490aa)
Potassium uptake protein KtrB n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABT0_CARHZ
ktrB; potassium uptake protein KtrB
Potassium uptake protein KtrB {ECO:0000313|EMBL:ABB15123.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carbox
rifcsphigho2_02_scaffold_24071_5
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5119..5775
DNA (657bp) protein (219aa)
Ktr system potassium uptake protein C n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0ILF9_9FIRM
Ktr system potassium uptake protein C {ECO:0000313|EMBL:EQB25412.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata
potassium uptake protein
rifcsphigho2_02_scaffold_24071_6

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5827..7149
DNA (1323bp) protein (441aa)
pgm; phosphoglucomutase (pgm) (EC:5.4.2.2); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=5048678 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoglucomutase (Pgm), phosphomannomutase / phosphoglucomutase {ECO:0000313|EMBL:KHO45341.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KHO45341.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45341.1};; TaxID=1579365 spe
phospho-sugar mutase
rifcsphigho2_02_scaffold_24071_7
unknown

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7267..7788
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24071_8

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7825..9147
DNA (1323bp) protein (441aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52946.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
MiaB-like tRNA modifying enzyme id=5048683 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
MiaB-like tRNA modifying enzyme
rifcsphigho2_02_scaffold_24071_9

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comp(9282..9425)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45069.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_24071_10
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(9493..11556)
DNA (2064bp) protein (688aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKU99675.1}; Flags: Fragment;; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
SMC protein
rifcsphigho2_02_scaffold_24071_11

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comp(11691..12029)
DNA (339bp) protein (113aa)
hypothetical protein id=5044252 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46533.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_24071_12
AR17, Woesearchaeaota, DPANN, Archaea

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comp(12026..12292)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364AD11
hypothetical protein Tax=AR17
hypothetical protein
rifcsphigho2_02_scaffold_24071_13
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

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comp(12497..13462)
DNA (966bp) protein (322aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000360FED9
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKQ64452.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_
rifcsphigho2_02_scaffold_24071_14
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

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13822..14292
DNA (471bp) protein (157aa)
50S ribosomal protein L15e {ECO:0000313|EMBL:KKQ64451.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15e
rifcsphigho2_02_scaffold_24071_15
unknown

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14443..14583
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24071_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(14580..14969)
DNA (390bp) protein (130aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_24071_17
AR11, Woesearchaeaota, DPANN, Archaea

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comp(14966..16444)
DNA (1479bp) protein (493aa)
hypothetical protein
hypothetical protein Tax=AR11
id=5102982 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_24071_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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16603..17487
DNA (885bp) protein (295aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=5094819 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pyridoxine biosynthesis glutamine amidotransferase, synthase subunit Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
pyridoxal phosphate synthase yaad subunit
rifcsphigho2_02_scaffold_24071_19
unknown

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17609..18604
DNA (996bp) protein (332aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24071_20
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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18619..19272
DNA (654bp) protein (218aa)
glutamine amidotransferase subunit PdxT; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RBG_16_KB1_OP1_55_9_curated
Glutamine amidotransferase subunit PdxT n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9V3_9BACI
pyridoxal phosphate synthase yaaE subunit
rifcsphigho2_02_scaffold_24071_21
unknown

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comp(19285..19593)
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24071_22
AR17, Woesearchaeaota, DPANN, Archaea

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comp(19704..20234)
DNA (531bp) protein (177aa)
Tax=AR17
rifcsphigho2_02_scaffold_24071_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20224..20796)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D04FD
Tax=AR17
Displaying 23 items

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