ggKbase home page

rifcsphigho2_02_scaffold_23476

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23476_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

191..2062
DNA (1872bp) protein (624aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5047130 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
rifcsphigho2_02_scaffold_23476_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


2513..3067
DNA (555bp) protein (185aa)
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 Tax=CG_Woesearch_02
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13P
rifcsphigho2_02_scaffold_23476_3
unknown

Not on your lists


3265..3945
DNA (681bp) protein (227aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK Tax=AR20
30S ribosomal protein S4
rifcsphigho2_02_scaffold_23476_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


3948..4343
DNA (396bp) protein (132aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11
rifcsphigho2_02_scaffold_23476_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

4383..5177
DNA (795bp) protein (265aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsphigho2_02_scaffold_23476_trna_1
unknown

Not on your lists

5198..5295
DNA (98bp)
transferRNA
rifcsphigho2_02_scaffold_23476_6
unknown

Not on your lists

5375..5710
DNA (336bp) protein (112aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23476_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


5733..6095
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=CG_Woesearch_02
50S ribosomal protein L18e
rifcsphigho2_02_scaffold_23476_8

Not on your lists


6097..6516
DNA (420bp) protein (140aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L13P
rifcsphigho2_02_scaffold_23476_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


6513..6914
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsphigho2_02_scaffold_23476_10

Not on your lists

comp(7407..7808)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S01H1_L02875 {ECO:0000313|EMBL:GAF82234.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_23476_11

Not on your lists

comp(7790..8251)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFH2_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L02875 {ECO:0000313|EMBL:GAF82235.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Displaying 12 items

View Taxonomy